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整合全基因组关联研究(GWAS)汇总数据与蛋白质组学以确定痴呆症中的潜在药物靶点

Combining GWAS Summary Data and Proteomics Identified Potential Drug Targets in Dementia.

作者信息

Zhao Yingjie, Fei Lu, Duan Yongtao

机构信息

Department of Cardiology, The First Hospital of Jilin University, Jilin University, Changchun, 130021, Jilin Province, China.

Department of Neurology, The First Hospital of Jilin University, Jilin University, Changchun, 130021, Jilin Province, China.

出版信息

Mol Neurobiol. 2025 Apr 23. doi: 10.1007/s12035-025-04967-6.

Abstract

Due to progressive cognitive loss and subsequent incapability of daily life, the development of novel therapeutics is urgently needed for dementia patients. We performed a two-sample bi-directional Mendelian randomization (MR) analysis using summary-level statistics to identify causality between peripheral and cerebrospinal fluid (CSF) proteins and the risk of dementia. Genetic variants were subtracted from the Genome-Wide Association Studies (GWAS) results. Wald ratio (WR) and inverse-variance weighted (IVW) ratio were utilized to estimate the causal effects of plasma and CSF proteins on dementia. Reverse MR, Steiger filtering, Bayesian co-localization phenotype scanning, and external validation were integrated to strengthen the robustness of primary MR results. After sensitivity analysis, six circulating proteins were identified in three dementia classifications, whereas no causality was found in frontotemporal dementia (FTD). Elevated levels of circulating C1R protein increased the odds of developing Alzheimer's disease (AD), while PILRA and CELA2A were estimated to protect against the pathogenesis of AD; genetically predicted increase of α-synuclein and APOE elevated the occurrence of Dementia of Lewy Bodies (DLB); elevated level of circulating CRP was assessed to increase the onset of vascular dementia (VD). Our MR analyses identified a genetically predicted association between circulating C1R, PILRA, and CELA2A and the risk of AD, causal estimates between α-syn, APOE protein, and the onset of DLB, and a robust correlation between CRP and the etiology of VD. This study might guide the discovery of disease etiology and build up a novel disease-modifying paradigm of dementia.

摘要

由于进行性认知功能丧失及随后的日常生活能力丧失,痴呆患者迫切需要新的治疗方法。我们使用汇总统计数据进行了两样本双向孟德尔随机化(MR)分析,以确定外周血和脑脊液(CSF)蛋白与痴呆风险之间的因果关系。从全基因组关联研究(GWAS)结果中减去基因变异。采用Wald比(WR)和逆方差加权(IVW)比来估计血浆和CSF蛋白对痴呆的因果效应。整合反向MR、Steiger过滤、贝叶斯共定位表型扫描和外部验证,以加强主要MR结果的稳健性。经过敏感性分析,在三种痴呆分类中鉴定出六种循环蛋白,而在额颞叶痴呆(FTD)中未发现因果关系。循环C1R蛋白水平升高增加了患阿尔茨海默病(AD)的几率,而PILRA和CELA2A被估计可预防AD的发病机制;基因预测的α-突触核蛋白和载脂蛋白E增加会提高路易体痴呆(DLB)的发生率;评估循环CRP水平升高会增加血管性痴呆(VD)的发病。我们的MR分析确定了循环C1R、PILRA和CELA2A与AD风险之间的基因预测关联,α-突触核蛋白、载脂蛋白E蛋白与DLB发病之间的因果估计,以及CRP与VD病因之间的强相关性。本研究可能指导疾病病因的发现,并建立一种新的痴呆疾病修饰范式。

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