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原子电荷对预测铱、钌和铑催化的位点选择性C-H硼化反应的重要性

The Importance of Atomic Charges for Predicting Site-Selective Ir-, Ru-, and Rh-Catalyzed C-H Borylations.

作者信息

Stephens Shannon M, Lambert Kyle M

机构信息

Department of Chemistry and Biochemistry, Old Dominion University, 4501 Elkhorn Ave, Norfolk, Virginia 23529, United States.

出版信息

J Org Chem. 2025 May 2;90(17):6000-6012. doi: 10.1021/acs.joc.5c00343. Epub 2025 Apr 23.

DOI:10.1021/acs.joc.5c00343
PMID:40268690
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12053941/
Abstract

A supervised machine learning model has been developed that allows for the prediction of site selectivity in late-stage C-H borylations. Model development was accomplished using literature data for the site-selective (≥95%) C-H borylation of 189 unique arene, heteroarene, and aliphatic substrates that feature a total of 971 possible sp or sp C-H borylation sites. The reported experimental data was supplemented with additional chemoinformatic descriptors, computed atomic charges at the C-H borylation sites, and data from parameterization of catalytically active tris-boryl complexes resulting from the combination of seven different Ir-, Ru-, and Rh-based precatalysts with eight different ligands. Of the over 1600 parameters investigated, the computed atomic charges (e.g., Hirshfeld, ChelpG, and Mulliken charges) on the hydrogen and carbon atoms at the site of borylation were identified as the most important features that allow for the successful prediction of whether a particular C-H bond will undergo a site-selective borylation. The overall accuracy of the developed model was 88.9% ± 2.5% with precision, recall, and F1 scores of 92-95% for the nonborylating sites and 65-75% for the sites of borylation. The model was demonstrated to be generalizable to molecules outside of the training/test sets with an additional validation set of 12 electronically and structurally diverse systems.

摘要

已开发出一种有监督的机器学习模型,可用于预测后期C-H硼化反应中的位点选择性。模型开发是利用文献数据完成的,这些数据涉及189种独特的芳烃、杂芳烃和脂肪族底物的位点选择性(≥95%)C-H硼化反应,这些底物共有971个可能的sp或sp C-H硼化位点。报告的实验数据补充了额外的化学信息描述符、C-H硼化位点处计算的原子电荷,以及由七种不同的基于铱、钌和铑的预催化剂与八种不同配体组合而成的催化活性三硼络合物的参数化数据。在所研究的1600多个参数中,硼化位点处氢原子和碳原子上计算的原子电荷(例如,Hirshfeld电荷、ChelpG电荷和Mulliken电荷)被确定为最重要的特征,这些特征能够成功预测特定的C-H键是否会发生位点选择性硼化反应。所开发模型的总体准确率为88.9%±2.5%,非硼化位点的精确率、召回率和F1分数为92 - 95%,硼化位点的精确率、召回率和F1分数为65 - 75%。该模型已被证明可推广到训练/测试集之外的分子,还有一个由12个电子和结构多样的系统组成的验证集。

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Digit Discov. 2024 Nov 28;4(1):222-233. doi: 10.1039/d4dd00284a. eCollection 2025 Jan 15.
2
Leveraging Language Model Multitasking To Predict C-H Borylation Selectivity.利用语言模型多任务来预测 C-H 硼化反应的选择性。
J Chem Inf Model. 2024 May 27;64(10):4286-4297. doi: 10.1021/acs.jcim.4c00137. Epub 2024 May 6.
3
Trialkoxysilane-Induced Iridium-Catalyzed para-Selective C-H Bond Borylation of Arenes.
三烷氧基硅烷诱导的铱催化芳烃的对位选择性C-H键硼化反应
Nat Commun. 2024 Apr 2;15(1):2847. doi: 10.1038/s41467-024-47205-8.
4
Enabling late-stage drug diversification by high-throughput experimentation with geometric deep learning.利用几何深度学习进行高通量实验,实现晚期药物多样化。
Nat Chem. 2024 Feb;16(2):239-248. doi: 10.1038/s41557-023-01360-5. Epub 2023 Nov 23.
5
Hybrid Machine Learning Approach to Predict the Site Selectivity of Iridium-Catalyzed Arene Borylation.用于预测铱催化芳烃硼化反应位点选择性的混合机器学习方法
J Am Chem Soc. 2023 Aug 9;145(31):17367-17376. doi: 10.1021/jacs.3c04986. Epub 2023 Jul 31.
6
Data-driven design of new chiral carboxylic acid for construction of indoles with C-central and C-N axial chirality via cobalt catalysis.通过钴催化作用,设计新型手性羧酸,用于构建具有 C 中心和 C-N 轴手性的吲哚,数据驱动。
Nat Commun. 2023 May 31;14(1):3149. doi: 10.1038/s41467-023-38872-0.
7
Late-stage C-H functionalization offers new opportunities in drug discovery.晚期碳氢键官能团化在药物研发中提供了新的机遇。
Nat Rev Chem. 2021 Aug;5(8):522-545. doi: 10.1038/s41570-021-00300-6. Epub 2021 Jul 13.
8
Data-Driven Multi-Objective Optimization Tactics for Catalytic Asymmetric Reactions Using Bisphosphine Ligands.基于数据驱动的双膦配体催化不对称反应的多目标优化策略。
J Am Chem Soc. 2023 Jan 11;145(1):110-121. doi: 10.1021/jacs.2c08513. Epub 2022 Dec 27.
9
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Org Lett. 2022 Nov 11;24(44):8147-8152. doi: 10.1021/acs.orglett.2c03188. Epub 2022 Oct 31.
10
A Multi-Objective Active Learning Platform and Web App for Reaction Optimization.用于反应优化的多目标主动学习平台和网络应用程序。
J Am Chem Soc. 2022 Nov 2;144(43):19999-20007. doi: 10.1021/jacs.2c08592. Epub 2022 Oct 19.