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多环芳烃污染老化焦化土壤中细菌的微生物多样性、共现模式及功能基因:对土壤健康和生物修复的启示

Microbial Diversity, Co-Occurrence Patterns, and Functional Genes of Bacteria in Aged Coking Contaminated Soils by Polycyclic Aromatic Hydrocarbons: Implications to Soil Health and Bioremediation.

作者信息

Zheng Liping, Yan Yifan, Li Qun, Du Junyang, Lu Xiaosong, Xu Li, Xie Qunhui, Chen Yangsheng, Zhang Aiguo, Zhao Bin

机构信息

State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.

University of Chinese Academy of Sciences, Beijing 100049, China.

出版信息

Microorganisms. 2025 Apr 10;13(4):869. doi: 10.3390/microorganisms13040869.

DOI:10.3390/microorganisms13040869
PMID:40284704
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12029627/
Abstract

PAH contamination from coking plants have received widespread attention. However, the microbial diversity, co-occurrence patterns, and functional genes of bacteria in aged coking contaminated soils by PAHs are still not clear. In our study, we used a macro-genetic approach to detect PAH-contaminated soils from both a coking production area (CA group) and an office zone (OA group) in an abandoned coking plant, and analyzed the characteristic bacteria and function genes, microbial network interaction patterns, and soil P-cycling in long-term PAH-contaminated soils. The results revealed that were significantly positively correlated with PAHs and rifcsplowo2 12 full 6514, candidatus RBG16609, and , which belong to , were characteristic bacteria in PAH-contaminated soils. The phn, which is the PAH degradation gene, was abundantly expressed in the PAH-contaminated soil. The gene cluster genes (, , and ) were significantly expressed in the CA group of PAH-contaminated soils ( < 0.05). By integrating microbial diversity, network structure, and functional genes, it offers a comprehensive understanding of soil ecosystem response indicators to prolonged PAH stress. The results of this study will provide new ideas for constructing an assessment index system for soil health and screening biomarkers for PAH-contaminated soils.

摘要

焦化厂的多环芳烃(PAH)污染已受到广泛关注。然而,长期受PAHs污染的焦化土壤中细菌的微生物多样性、共生模式和功能基因仍不清楚。在我们的研究中,我们采用宏基因组方法检测了一个废弃焦化厂的焦化生产区(CA组)和办公区(OA组)的PAH污染土壤,并分析了长期受PAH污染土壤中的特征细菌和功能基因、微生物网络相互作用模式以及土壤磷循环。结果表明,[此处原文缺失具体内容]与PAHs显著正相关,[此处原文缺失具体内容]以及属于[此处原文缺失具体内容]的candidatus RBG16609和[此处原文缺失具体内容]是PAH污染土壤中的特征细菌。作为PAH降解基因的phn在PAH污染土壤中大量表达。基因簇基因([此处原文缺失具体内容]、[此处原文缺失具体内容]和[此处原文缺失具体内容])在PAH污染土壤的CA组中显著表达(P<0.05)。通过整合微生物多样性、网络结构和功能基因,它提供了对土壤生态系统对长期PAH胁迫响应指标的全面理解。本研究结果将为构建土壤健康评估指标体系和筛选PAH污染土壤的生物标志物提供新思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/51d2f250e500/microorganisms-13-00869-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/046e0a1cdb91/microorganisms-13-00869-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/2679b9630ffb/microorganisms-13-00869-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/5e44f1b66581/microorganisms-13-00869-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/d690d010692b/microorganisms-13-00869-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/5c2a21bc51a9/microorganisms-13-00869-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/51d2f250e500/microorganisms-13-00869-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/046e0a1cdb91/microorganisms-13-00869-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/2679b9630ffb/microorganisms-13-00869-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/5e44f1b66581/microorganisms-13-00869-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/d690d010692b/microorganisms-13-00869-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/5c2a21bc51a9/microorganisms-13-00869-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e93/12029627/51d2f250e500/microorganisms-13-00869-g006.jpg

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本文引用的文献

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J Basic Microbiol. 2025 Feb;65(2):e2400448. doi: 10.1002/jobm.202400448. Epub 2024 Oct 29.
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Assessing the ecological impacts of polycyclic aromatic hydrocarbons petroleum pollutants using a network toxicity model.利用网络毒性模型评估多环芳烃石油污染物的生态影响。
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Distribution of bound-PAH residues and their correlations with the bacterial community at different depths of soil from an abandoned chemical plant site.
受污染土壤中结合态多环芳烃残留的分布及其与细菌群落的相关性研究——以某废弃化工厂场地为例。
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Insights into the vertical distribution of the microbiota in steel plant soils with potentially toxic elements and PAHs contamination after 60 years operation: Abundance, structure, co-occurrence network and functionality.经过 60 年的运行后,具有潜在有毒元素和多环芳烃污染的钢厂土壤中微生物群落的垂直分布研究:丰度、结构、共存网络和功能。
Sci Total Environ. 2021 Sep 10;786:147338. doi: 10.1016/j.scitotenv.2021.147338. Epub 2021 Apr 26.
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Critical review on soil phosphorus migration and transformation under freezing-thawing cycles and typical regulatory measurements.冻融循环下土壤磷迁移转化的研究进展及典型调控措施综述
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Ecotoxicol Environ Saf. 2020 Oct 15;203:110931. doi: 10.1016/j.ecoenv.2020.110931. Epub 2020 Jul 15.
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A comprehensive review of metabolic and genomic aspects of PAH-degradation.PAH 降解的代谢和基因组方面的综合评述。
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Post relocation of industrial sites for decades: Ascertain sources and human risk assessment of soil polycyclic aromatic hydrocarbons.工业场地搬迁几十年后:土壤多环芳烃的来源确定和人体风险评估。
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