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水产养殖中病原检测多重实时荧光定量PCR技术的建立

Development of Multiple Real-Time Fluorescent Quantitative PCR for Pathogen Detection in Aquaculture.

作者信息

Zhang Binzhe, Qiu Yulie, Shi Chenxi, Zhang Jian

机构信息

School of Ocean, Yantai University, Yantai 264005, China.

Shandong Engineering Research Center of Healthy Land-Sea Relay Farming of Economic Fish, Yantai 264005, China.

出版信息

Vet Sci. 2025 Apr 2;12(4):327. doi: 10.3390/vetsci12040327.

DOI:10.3390/vetsci12040327
PMID:40284829
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12030866/
Abstract

The genus represents a critical group of bacterial pathogens in the marine environment globally, leading to massive mortality in the aquaculture industry. Diagnosing vibriosis, an infection caused by species, in clinical samples poses challenges due to its non-specific clinical manifestations. In this study, we developed a TaqMan probe-based multiplex real-time PCR method for the simultaneous detection and quantification of four pathogens: (Va), (Val), (Vh), and (Vsc). The assay targets conserved intra-species regions and specific inter-species regions using specific primers and TaqMan probes to ensure specificity. Sensitivity analysis demonstrated that the multiplex real-time PCR assay could simultaneously detect the four different bacteria, with detection limits of 26-60 copies per reaction, making it 100 times more sensitive than conventional PCR assays. Additionally, the assay exhibited high reproducibility, with intra- and inter-group coefficients of variation below 1.4%. A total of 63 clinical samples was analyzed using this established assay, which successfully detected both single and mixed infections. These results demonstrate that the multiplex quantitative PCR assay is a rapid, specific, and sensitive diagnostic tool for the detection of Va, Val, Vh, and Vsc, making it suitable for monitoring these bacteria in both single- and co-infected clinical samples.

摘要

该属是全球海洋环境中一类关键的细菌病原体,会导致水产养殖业大量死亡。由于其临床表现不具特异性,在临床样本中诊断弧菌病(一种由该属物种引起的感染)存在挑战。在本研究中,我们开发了一种基于TaqMan探针的多重实时PCR方法,用于同时检测和定量四种弧菌病原体:哈维氏弧菌(Va)、溶藻弧菌(Val)、副溶血弧菌(Vh)和创伤弧菌(Vsc)。该检测方法使用特异性引物和TaqMan探针靶向种内保守区域和种间特异性区域,以确保特异性。敏感性分析表明,多重实时PCR检测方法能够同时检测这四种不同的细菌,每个反应的检测限为26 - 60个拷贝,比传统PCR检测方法灵敏100倍。此外,该检测方法具有高重复性,组内和组间变异系数均低于1.4%。使用此既定检测方法共分析了63份临床样本,成功检测出单一感染和混合感染情况。这些结果表明,多重定量PCR检测方法是一种快速、特异且灵敏的诊断工具,可用于检测Va、Val、Vh和Vsc,适用于监测单一感染和共同感染的临床样本中的这些细菌。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/0c5acb1fc99a/vetsci-12-00327-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/5fed7a6954aa/vetsci-12-00327-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/521da27bc70e/vetsci-12-00327-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/d7b9f0d10bf1/vetsci-12-00327-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/87704228ef94/vetsci-12-00327-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/0c5acb1fc99a/vetsci-12-00327-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/5fed7a6954aa/vetsci-12-00327-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/521da27bc70e/vetsci-12-00327-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/d7b9f0d10bf1/vetsci-12-00327-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/87704228ef94/vetsci-12-00327-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2885/12030866/0c5acb1fc99a/vetsci-12-00327-g005.jpg

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本文引用的文献

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Sci Rep. 2024 Nov 12;14(1):27740. doi: 10.1038/s41598-024-78803-7.
2
Expanding the Spectrum of Diseases and Disease Associations Caused by and Related Species.扩大由[相关物种]引起的疾病及疾病关联的范围。 (注:原文中“and Related Species”前似乎缺失了具体物种信息)
Microorganisms. 2024 May 20;12(5):1031. doi: 10.3390/microorganisms12051031.
3
Development of a real-time recombinase-aided amplification assay for rapid and sensitive detection of .
建立一种实时重组酶辅助扩增检测方法,用于快速灵敏检测 。
Front Cell Infect Microbiol. 2024 Mar 28;14:1355056. doi: 10.3389/fcimb.2024.1355056. eCollection 2024.
4
Coinfection of Cage-Cultured Spotted Sea Bass () with and subsp. Associated with Skin Ulcer.网箱养殖的花鲈()与亚种共同感染并伴有皮肤溃疡。 (原文中“()”及“subsp.”处信息缺失,以上为按格式要求尽量完整的翻译)
Microorganisms. 2024 Feb 29;12(3):503. doi: 10.3390/microorganisms12030503.
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Development of a quadruple qRT-PCR assay for simultaneous identification of hypervirulent and carbapenem-resistant .建立一种四重 qRT-PCR 检测方法,用于同时鉴定高毒力和耐碳青霉烯的.
Microbiol Spectr. 2024 Jan 11;12(1):e0071923. doi: 10.1128/spectrum.00719-23. Epub 2023 Dec 7.
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Int J Mol Sci. 2023 Aug 8;24(16):12542. doi: 10.3390/ijms241612542.
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