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中国新型猪细小病毒8型毒株的检测与分子特征分析

Detection and Molecular Characterization of Novel Porcine Parvovirus 8 Strains in China.

作者信息

Chen Wei, Hu Yanqing, Qin Yan, Li Yuying, Zhang Xinyu, Huang Haixin, Liu Mengjia, Zheng Yuping, Lu Xuelian, Wang Qiaoqiong, Yang Jianuo, Kang Liting, Xie Lulu, Zhao Baopeng, Lan Tian, Sun Wenchao

机构信息

Wenzhou Key Laboratory for Virology and Immunology, Institute of Virology, Wenzhou University, Wenzhou 325035, China.

出版信息

Viruses. 2025 Apr 8;17(4):543. doi: 10.3390/v17040543.

DOI:10.3390/v17040543
PMID:40284986
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12031171/
Abstract

Porcine parvovirus 8 (PPV8), the most recently discovered PPV genotype, was first reported in pigs in Guangdong, China, in 2021. In this study, we assessed 69 lung tissue samples collected from animals with high fever or respiratory syndrome on pig farms in Guangxi in 2018. Five nearly full-length genome sequences were characterized and analyzed. The percentage of PPV8-positive samples was 13.04% (9/69), and five complete PPV8 sequences were obtained, which were designated PPV8-A, PPV-B, PPV8-G, PPV8-H, and PPV8-I. The genomic sequence homology among the five PPV8 strains and other PPVs was 25.91-98.84%, with the closest genetic relationship to PPV8-GDJM2021 (98.84%), followed by PPV1 (44.64%). For the NS1 protein, phylogenetic analysis revealed that the identified PPV8-I was closely related to PPV8-GDJM2021 and that PPV8-A was closely related to PPV8-H, whereas PPV8-B and PPV8-G were more distantly related to the other PPV8 strains. For the VP1 protein, phylogenetic analysis revealed a close correlation between PPV8-H and PPV8-GMJM2021, whereas PPV8-A, PPV8-B, PPV8-G, and PPV8-I were more distantly related. In conclusion, five nearly full-length sequences were amplified, and the molecular characteristics of PPV8 were analyzed. These findings improve our understanding of the PPV8 genome.

摘要

猪细小病毒8型(PPV8)是最近发现的PPV基因型,于2021年首次在中国广东的猪中报道。在本研究中,我们评估了2018年从广西猪场高热或呼吸道综合征动物采集的69份肺组织样本。对5个近乎全长的基因组序列进行了特征分析。PPV8阳性样本的百分比为13.04%(9/69),获得了5个完整的PPV8序列,分别命名为PPV8-A、PPV-B、PPV8-G、PPV8-H和PPV8-I。这5个PPV8毒株与其他PPV的基因组序列同源性为25.91%-98.84%,与PPV8-GDJM2021的遗传关系最密切(98.84%),其次是PPV1(44.64%)。对于NS1蛋白,系统发育分析表明,鉴定出的PPV8-I与PPV8-GDJM2021密切相关,PPV8-A与PPV8-H密切相关,而PPV8-B和PPV8-G与其他PPV8毒株的关系较远。对于VP1蛋白,系统发育分析表明PPV8-H与PPV8-GMJM2021密切相关,而PPV8-A、PPV8-B、PPV8-G和PPV8-I的关系较远。总之,扩增了5个近乎全长的序列,并分析了PPV8的分子特征。这些发现增进了我们对PPV8基因组的了解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/7d77f6ba1a49/viruses-17-00543-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/896ab0e6aa55/viruses-17-00543-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/1434d3491c03/viruses-17-00543-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/595d27b48299/viruses-17-00543-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/8129fe9469c5/viruses-17-00543-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/7d77f6ba1a49/viruses-17-00543-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/896ab0e6aa55/viruses-17-00543-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/1434d3491c03/viruses-17-00543-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/595d27b48299/viruses-17-00543-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/8129fe9469c5/viruses-17-00543-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5843/12031171/7d77f6ba1a49/viruses-17-00543-g005.jpg

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Viruses. 2023 Dec 9;15(12):2398. doi: 10.3390/v15122398.
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Genome characteristics of atypical porcine pestivirus from abortion cases in Shandong Province, China.中国山东省流产病例中出现的非典型猪瘟病毒的基因组特征。
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Detection and genetic evolution analysis of porcine parvovirus type 7 (PPV7) in Fujian Province.
福建省猪细小病毒 7 型(PPV7)的检测与遗传进化分析。
Infect Genet Evol. 2023 Nov;115:105515. doi: 10.1016/j.meegid.2023.105515. Epub 2023 Oct 21.
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Identification and in vitro characterization of a novel porcine parvovirus 6 in Russia.鉴定和分析俄罗斯一种新型猪细小病毒 6,并进行体外研究。
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Genome Sequence of Chinese Porcine Parvovirus Strain BJ2.中国猪细小病毒BJ2株的基因组序列
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