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利用转录组学和蛋白质组学分析深入了解蝎子防御素的抗菌机制

Insights into the Antimicrobial Mechanisms of a Scorpion Defensin on Using Transcriptomic and Proteomic Analyses.

作者信息

Yang Xuhua, Zhang Haozhen, Lu Sijia, Guo Yiyuan, Li Yitong, Qin Chenhu, Zuo Zheng, Wu Yingliang, Cao Zhijian

机构信息

National "111" Center for Cellular Regulation and Molecular Pharmaceutics, Key Laboratory of Fermentation Engineering (Ministry of Education), Hubei University of Technology, Wuhan 430068, China.

College of Life Sciences, Wuhan University, Wuhan 430072, China.

出版信息

Molecules. 2025 Mar 30;30(7):1542. doi: 10.3390/molecules30071542.

DOI:10.3390/molecules30071542
PMID:40286177
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11990343/
Abstract

Defensins constitute a family of cationic antimicrobial peptides that act against different bacteria; however, global information regarding their antibacterial mechanisms from omics-based analyses is highly limited. In this study, transcriptomics and proteomics were used to explore the antibacterial mechanisms of defensin (BmKDfsin4) originally isolated from a scorpion on a common Gram-positive bacterium. (AB94004) was treated with BmKDfsin4 for 15, 30, or 45 min based on its ability to moderately inhibit bacterial growth for one hour. Compared with those in the control group, more than 1000 genes and nearly 500 proteins in were significantly differentially expressed after BmKDfsin4 treatment. In-depth analysis revealed that BmKDfsin4 significantly upregulated bacterial ribosome-related pathways and ribosomal components. In contrast, BmKDfsin4 also significantly downregulated the synthesis and metabolism pathways of bacterial amino acids. Moreover, BmKDfsin4 inhibited the synthesis pathways of teichoic acid and peptidoglycan, which are the key components of the cell wall in . Furthermore, glycolysis and other metabolic processes in were markedly reduced by BmKDfsin4. Overall, the global information detected from revealed the multiple antibacterial mechanisms of BmKDfsin4, which could encourage the exploration of global bacterial information from the defensin family with high degrees of sequence variability and accelerate the research and development of defensins as new antibacterial agents.

摘要

防御素是一类阳离子抗菌肽,可对抗不同细菌;然而,基于组学分析的关于其抗菌机制的全面信息非常有限。在本研究中,转录组学和蛋白质组学被用于探索最初从蝎子中分离出的防御素(BmKDfsin4)对一种常见革兰氏阳性菌(AB94004)的抗菌机制。基于其在一小时内适度抑制细菌生长的能力,用BmKDfsin4处理(AB94004)15、30或45分钟。与对照组相比,经BmKDfsin4处理后,(AB94004)中有1000多个基因和近500种蛋白质显著差异表达。深入分析表明,BmKDfsin4显著上调细菌核糖体相关途径和核糖体成分。相反,BmKDfsin4也显著下调细菌氨基酸的合成和代谢途径。此外,BmKDfsin4抑制了(AB94004)细胞壁关键成分磷壁酸和肽聚糖的合成途径。此外,BmKDfsin4使(AB94004)中的糖酵解和其他代谢过程明显减少。总体而言,从(AB94004)检测到的全面信息揭示了BmKDfsin4的多种抗菌机制,这可能会促进对具有高度序列变异性的防御素家族的全面细菌信息的探索,并加速防御素作为新型抗菌剂的研发。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/ba6c53992559/molecules-30-01542-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/5fbec0cab76c/molecules-30-01542-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8aecc8aeab42/molecules-30-01542-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/308f443ae75d/molecules-30-01542-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/77d0919b10d1/molecules-30-01542-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8ec7469c9e0d/molecules-30-01542-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8c97ece6b498/molecules-30-01542-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/485e54f8ee1a/molecules-30-01542-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/ccbb18c3c9b9/molecules-30-01542-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/ba6c53992559/molecules-30-01542-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/5fbec0cab76c/molecules-30-01542-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8aecc8aeab42/molecules-30-01542-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/308f443ae75d/molecules-30-01542-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/77d0919b10d1/molecules-30-01542-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8ec7469c9e0d/molecules-30-01542-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/8c97ece6b498/molecules-30-01542-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/485e54f8ee1a/molecules-30-01542-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/ccbb18c3c9b9/molecules-30-01542-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d283/11990343/ba6c53992559/molecules-30-01542-g009.jpg

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