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突破障碍,巨大的结晶难题:通过计算和核磁共振研究探索五规则之外化合物中的阻转异构现象。

Beyond Barriers, Big Crystallization Hurdles: Atropisomerism in Beyond Rule of Five Compounds Explored by Computational and NMR Studies.

作者信息

Stamos Nikolaos Angelos, Ries Benjamin, Schneider Regina, Tzvetkova Pavleta, Montel Florian, Jandl Christian, Werthmann Ulrike

机构信息

CMC, DDS, Discovery Research, Boehringer Ingelheim Pharma GmbH & Co. KG, 88400 Biberach an der Riss, Germany.

Computational Chemistry, Medicinal Chemistry, Discovery Research, Boehringer Ingelheim Pharma GmbH & Co. KG, 88400 Biberach an der Riss, Germany.

出版信息

Mol Pharm. 2025 Jun 2;22(6):3268-3285. doi: 10.1021/acs.molpharmaceut.5c00204. Epub 2025 Apr 27.

DOI:10.1021/acs.molpharmaceut.5c00204
PMID:40287850
Abstract

Stereochemical purity, stability, and selection of a suitable solid-state form are pivotal factors in pharmaceutical development, particularly for complex beyond Rule of 5 (bRo5) compounds. In this study, we explore the intricate interplay between atropisomerism and crystallization using two model bRo5 compounds, namely, ACBI1 and BI201335, both violating three of four Lipinski's rules. One of the tool compounds exhibits Class 2 atropisomeric behavior, and the other is devoid of it. A diverse array of crystallization methods, including solution-phase crystallization, cocrystallization, and salt formation, were applied, revealing the critical role of atropisomerism-induced stereochemistry in polymorphism and nucleation outcomes. torsion profile calculations and NMR studies were employed to elucidate the rotational energy barriers and confirm the presence or absence of atropisomerism. This comprehensive analysis highlights the significance of understanding stereochemical phenomena such as atropisomerism in designing and developing bRo5 compounds. By integrating advanced analytical techniques and crystallization strategies, this work provides novel insights into tailoring pharmaceutical properties for next-generation therapeutics.

摘要

立体化学纯度、稳定性以及合适固态形式的选择是药物研发中的关键因素,对于复杂的超过五规则(bRo5)的化合物而言尤其如此。在本研究中,我们使用两种模型bRo5化合物ACBI1和BI201335探索了阻转异构现象与结晶之间的复杂相互作用,这两种化合物均违反了Lipinski四条规则中的三条。其中一种工具化合物表现出2类阻转异构行为,而另一种则没有。我们应用了多种结晶方法,包括溶液相结晶、共结晶和盐形成,揭示了阻转异构诱导的立体化学在多晶型和成核结果中的关键作用。采用扭转轮廓计算和核磁共振研究来阐明旋转能垒并确认阻转异构现象的存在与否。这种全面分析突出了理解诸如阻转异构等立体化学现象在设计和开发bRo5化合物中的重要性。通过整合先进的分析技术和结晶策略,这项工作为定制下一代治疗药物的性质提供了新的见解。

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本文引用的文献

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Atropisomeric Foldamers.阻转异构折叠体
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High-throughput nanoscale crystallization of dihydropyridine active pharmaceutical ingredients.二氢吡啶类原料药的高通量纳米结晶。
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