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针对牛结核病的驱动多表位亚单位候选疫苗。

Driven Multi-Epitope Subunit Candidate Vaccine against Bovine Tuberculosis.

作者信息

Faysal Md Atik, Tanni Fatema Yeasmin, Rahman Md Mahfujur, Rahman Md Anisur, Chowdhury Md Shahidur Rahman, Cho Ho-Seong, Hossain Md Mukter, Uddin Md Bashir

机构信息

Department of Medicine, Sylhet Agricultural University, Sylhet 3100, Bangladesh.

School of Veterinary Medicine and Biomedical Sciences, University of Nebraska, Lincoln, NE 68583, USA.

出版信息

Transbound Emerg Dis. 2024 Sep 4;2024:5534041. doi: 10.1155/2024/5534041. eCollection 2024.

Abstract

Bovine tuberculosis (bTB), caused by , poses significant zoonotic and economic challenges globally. The current prevention and treatment options are limited and increasingly complicated by the emergence of multidrug-resistant strains. This study employs reverse vaccinology and immunoinformatics to design a multi-epitope subunit vaccine targeting the MPB83, ArfA, DnaK, GrpE, and LpqH proteins of . The T-cell and B-cell epitopes of the candidate vaccine were predicted and evaluated for antigenicity, allergenicity, and toxicity. The promising epitopes were then assembled into three vaccine constructs (bTBV1, bTBV2, and bTBV3) using appropriate adjuvants, pan HLA DR-binding epitope (PADRE), and linkers. The constructs were analyzed for physicochemical properties, 3D structure, cytokines induction and stability, followed by molecular docking with bovine CD molecules and toll-like receptor, TLR-9. Among the candidates, bTBV3 was chosen as one of the most promising vaccine candidates due to its high aliphatic index (67.60), lowest instability score (27.26), and a strong binding affinity. Molecular dynamics simulations and the results of interactions between the vaccine-receptor complexes (eigenvalue 2.318704e-06) show that the vaccine construct bTBV3 is stable. immune simulation findings, such as elevated IgM levels and increased Th cell populations, suggest that the designed multi-epitope vaccine candidate bTBV3 elicits robust humoral and cellular immune responses, confirming the vaccine's potential efficacy. Additionally, codon optimization (CAI: 0.997 and GC: 54.687%) and cloning facilitated efficient expression in . This study highlights the potential of bioinformatics-driven approaches in developing effective subunit vaccines against bTB, providing a foundation for experimental validation and future applications in combating this pervasive zoonotic disease, bovine tuberculosis.

摘要

牛结核病(bTB)由[未提及病原体]引起,在全球范围内带来了重大的人畜共患病和经济挑战。当前的预防和治疗选择有限,且由于多重耐药菌株的出现而愈发复杂。本研究采用反向疫苗学和免疫信息学方法,设计一种针对[未提及病原体]的MPB83、ArfA、DnaK、GrpE和LpqH蛋白的多表位亚单位疫苗。对候选疫苗的T细胞和B细胞表位进行了预测,并评估了其抗原性、致敏性和毒性。然后,使用合适的佐剂、泛HLA DR结合表位(PADRE)和连接子,将有前景的表位组装成三种疫苗构建体(bTBV1、bTBV2和bTBV3)。分析了这些构建体的物理化学性质、三维结构、细胞因子诱导和稳定性,随后与牛CD分子和Toll样受体TLR-9进行分子对接。在候选疫苗中,bTBV3因其高脂肪族指数(67.60)、最低的不稳定性评分(27.26)和强结合亲和力,被选为最有前景的候选疫苗之一。分子动力学模拟以及疫苗-受体复合物之间相互作用的结果(特征值2.318704e-06)表明,疫苗构建体bTBV3是稳定的。免疫模拟结果,如IgM水平升高和Th细胞群体增加,表明设计的多表位候选疫苗bTBV3能引发强烈的体液免疫和细胞免疫反应,证实了该疫苗的潜在疗效。此外,密码子优化(CAI:0.997和GC:54.687%)和[未提及的克隆方式]促进了其在[未提及的表达系统]中的高效表达。本研究突出了生物信息学驱动方法在开发针对牛结核病的有效亚单位疫苗方面的潜力,为对抗这种普遍存在的人畜共患病——牛结核病的实验验证和未来应用奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a33c/12016833/d9a1a7daa4e4/TBED2024-5534041.001.jpg

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