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针对……开发多表位疫苗的分析

analysis for the development of multi-epitope vaccines against .

作者信息

Yun Jin-Seung, Kim A Reum, Kim Soo Min, Shin Eunkyung, Ha Sang-Jun, Kim Dokeun, Jeong Hye-Sook

机构信息

Korea National Institute of Health, Korea Disease Control and Prevention Agency, CheongJu, Republic of Korea.

Department of Biochemistry, College of Life Science and Biotechnology, Yonsei University, Seoul, Republic of Korea.

出版信息

Front Immunol. 2024 Nov 18;15:1474346. doi: 10.3389/fimmu.2024.1474346. eCollection 2024.

DOI:10.3389/fimmu.2024.1474346
PMID:39624097
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11609213/
Abstract

As Bacille Calmette-Guérin (BCG) vaccine's effectiveness is limited to only children, the development of new tuberculosis (TB) vaccines is being studied using several platforms, and a novel TB vaccine that overcomes this limitation is required. In this study, we designed an effective multi-epitope vaccine against using immunoinformatic analysis. First, we selected 11 highly antigenic proteins based on previous research: Ag85A, Ag85B, Ag85C, ESAT-6, MPT64, Rv2660c, TB10.4, HspX, GlfT2, Fas, and IniB. Among these antigens, 10 linear B-cell epitopes, 9 helper T-cell epitopes, and 16 cytotoxic T-cell epitopes were predicted to design the multi-epitope vaccine. To improve the immunogenicity of the candidate vaccine, three different adjuvants, griselimycin, human beta-defensin 3 (HBD3), and 50s ribosomal protein (50sRP), were attached with linker sequences to the vaccine model. The immunogenic, antigenic, allergenic, and physicochemical properties of the resulting designed multi-epitope vaccines were predicted . Moreover, 3D structural modeling, refinement, and validation were used to select a model for further evaluation. Molecular docking analysis revealed a consistent and significant binding affinity of the candidate vaccine for toll-like receptors (TLRs), TLR-2, -3, and -4. Immune simulation performed using C-ImmSim demonstrated that three rounds of immunization with multi-epitope vaccines induced a high production of cytokines and immunoglobulins related with both cellular and humoral immune response. Moreover, we constructed vaccine candidate composed of 50sRP and evaluated its immunogenicity in a mouse model. Consequently, this -engineered multi-epitope structure can elicit adaptive immune responses and represents a promising novel candidate for TB vaccine development.

摘要

由于卡介苗(BCG)疫苗的有效性仅限于儿童,因此正在使用多种平台研究新型结核病(TB)疫苗,并且需要一种克服这一局限性的新型TB疫苗。在本研究中,我们通过免疫信息学分析设计了一种有效的抗结核多表位疫苗。首先,我们根据先前的研究选择了11种高抗原性蛋白:Ag85A、Ag85B、Ag85C、ESAT-6、MPT64、Rv2660c、TB10.4、HspX、GlfT2、Fas和IniB。在这些抗原中,预测了10个线性B细胞表位、9个辅助性T细胞表位和16个细胞毒性T细胞表位,以设计多表位疫苗。为了提高候选疫苗的免疫原性,将三种不同的佐剂,即griselimycin、人β-防御素3(HBD3)和50S核糖体蛋白(50sRP),通过接头序列连接到疫苗模型上。预测了所得设计的多表位疫苗的免疫原性、抗原性、致敏性和物理化学性质。此外,使用3D结构建模、优化和验证来选择模型进行进一步评估。分子对接分析显示候选疫苗与Toll样受体(TLR)、TLR-2、-3和-4具有一致且显著的结合亲和力。使用C-ImmSim进行的免疫模拟表明,用多表位疫苗进行三轮免疫可诱导与细胞免疫和体液免疫反应相关的细胞因子和免疫球蛋白的高产量。此外,我们构建了由50sRP组成的候选疫苗,并在小鼠模型中评估了其免疫原性。因此,这种工程化的多表位结构可以引发适应性免疫反应,是一种有前途的新型TB疫苗开发候选物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4587/11609213/72498dd0304c/fimmu-15-1474346-g008.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4587/11609213/083cadeae787/fimmu-15-1474346-g007.jpg
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