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TBXT基因的rs2305089单核苷酸多态性与良性脊索细胞瘤和脊索瘤相关。

The TBXT rs2305089 SNP links the benign notochordal cell tumour and chordoma.

作者信息

Usher Inga, O'Donnell Paul, Ligammari Lorena, Harder Dorothee, Brown Wendy, Choi David, Cool Paul, Cottone Lucia, Flanagan Adrienne M

机构信息

Department of Pathology, University College London Cancer Institute, London, UK.

Victor Horsley Department of Neurosurgery, The National Hospital for Neurology and Neurosurgery, London, UK.

出版信息

J Pathol. 2025 Jul;266(3):247-257. doi: 10.1002/path.6427. Epub 2025 May 5.

DOI:10.1002/path.6427
PMID:40323130
Abstract

The aim of this research was to investigate the pathogenesis of the bone cancer chordoma and the role of the germline rs2305089 SNP in TBXT. Using medical imaging and genotyping studies, we observed that benign notochordal cell tumours (BNCTs) were associated with chordomas and with the variant rs2305089 A-allele with enrichment of the AA genotype compared to controls. We engineered in vitro mesoderm models, representing notochord, which showed higher expression of TBXT and activation of its regulatory network in the presence of the variant A allele. Heterozygotes (GA) displayed enrichment of Wnt/β-catenin and epithelial mesenchymal transition pathways, faster cell migratory capacity, and altered expression of endoplasmic reticulum and intracellular transport mediators. WT lines (GG) were enriched for metabolic pathways and MTORC1 signalling, suggesting that rs2305089 genotype regulates notochord vacuoles during notochord regression. By leveraging patient-derived data and functional studies, we show that the variant rs2305089 A-allele predisposes to BNCTs and ultimately to chordomas. © 2025 The Author(s). The Journal of Pathology published by John Wiley & Sons Ltd on behalf of The Pathological Society of Great Britain and Ireland.

摘要

本研究的目的是调查骨癌脊索瘤的发病机制以及种系rs2305089单核苷酸多态性在TBXT中的作用。通过医学成像和基因分型研究,我们观察到良性脊索细胞瘤(BNCTs)与脊索瘤以及rs2305089 A等位基因变异相关,与对照组相比,AA基因型富集。我们构建了代表脊索的体外中胚层模型,其显示在存在变异A等位基因的情况下,TBXT表达更高且其调控网络被激活。杂合子(GA)显示Wnt/β-连环蛋白和上皮-间质转化途径富集,细胞迁移能力更快,内质网和细胞内运输介质的表达改变。野生型系(GG)在代谢途径和MTORC1信号传导方面富集,这表明rs2305089基因型在脊索退化过程中调节脊索空泡。通过利用患者来源的数据和功能研究,我们表明rs2305089 A等位基因变异易患BNCTs并最终易患脊索瘤。© 2025作者。《病理学杂志》由约翰·威利父子有限公司代表大不列颠及爱尔兰病理学会出版。

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本文引用的文献

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Structural insights into human brachyury DNA recognition and discovery of progressible binders for cancer therapy.人类短尾相关蛋白DNA识别的结构见解及用于癌症治疗的可进展性结合剂的发现。
Nat Commun. 2025 Feb 14;16(1):1596. doi: 10.1038/s41467-025-56213-1.
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On the genetic basis of tail-loss evolution in humans and apes.人类和猿类尾巴缺失进化的遗传基础。
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Transcriptional Profiling Supports the Notochordal Origin of Chordoma and Its Dependence on a TGFB1-TBXT Network.
转录谱分析支持脊索瘤的脊索起源及其对TGFB1-TBXT网络的依赖性。
Am J Pathol. 2023 May;193(5):532-547. doi: 10.1016/j.ajpath.2023.01.014. Epub 2023 Feb 17.
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PROSER2 is a poor prognostic biomarker for patients with osteosarcoma and promotes proliferation, migration and invasion of osteosarcoma cells.PROSER2是骨肉瘤患者预后不良的生物标志物,可促进骨肉瘤细胞的增殖、迁移和侵袭。
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A saturated map of common genetic variants associated with human height.与人类身高相关的常见遗传变异的饱和图谱。
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Aberrant paracrine signalling for bone remodelling underlies the mutant histone-driven giant cell tumour of bone.异常的旁分泌信号导致破骨细胞重塑,这是突变组蛋白驱动的骨巨细胞瘤的基础。
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CXCL5: A coachman to drive cancer progression.CXCL5:驱动癌症进展的“车夫”
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Optimizing CRISPR/Cas9 Editing of Repetitive Single Nucleotide Variants.优化重复单核苷酸变体的CRISPR/Cas9编辑
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