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用于脑大变形图像配准的混合变压器与卷积迭代优化金字塔网络

Hybrid transformer and convolution iteratively optimized pyramid network for brain large deformation image registration.

作者信息

Cui Xinxin, Zhou Yuee, Wei Caihong, Suo Guodong, Jin Fengqing, Yang Jianlan

机构信息

School of Medical Information Engineering, Gansu University of Traditional Chinese Medicine, Lanzhou, Gansu, 730000, China.

Quanzhou Orthopedic Traumatological Hospital of Fujian University of Traditional Chinese Medicine, Quanzhou, 362000, Fujian, China.

出版信息

Sci Rep. 2025 May 5;15(1):15707. doi: 10.1038/s41598-025-00403-w.

DOI:10.1038/s41598-025-00403-w
PMID:40325020
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12053083/
Abstract

In recent years, the pyramid-based encoder-decoder network architecture has become a popular solution to the problem of large deformation image registration due to its excellent multi-scale deformation field prediction ability. However, there are two main limitations in existing research: one is that it over-focuses on the fusion of multi-layer deformation sub-fields on the decoding path, while ignoring the impact of feature encoders on network performance; the other is the lack of specialized design for the characteristics of feature maps at different scales. To this end, we propose an innovative hybrid Transformer and convolution iteratively optimized pyramid network for large deformation brain image registration. Specifically, four encoder variants are designed to study the impact of different structures on the performance of the pyramid registration network. Secondly, the Swin-Transformer module is combined with the convolution iterative strategy, and each layer of the decoder is carefully designed according to the semantic information characteristics of different decoding layers. Extensive experimental results on three public brain magnetic resonance imaging datasets show that our method has the highest registration accuracy compared with 9 cutting-edge registration methods, which fully verifies the effectiveness and application potential of our model design.

摘要

近年来,基于金字塔的编码器-解码器网络架构因其出色的多尺度变形场预测能力,已成为解决大变形图像配准问题的一种流行方案。然而,现有研究存在两个主要局限性:一是过度关注解码路径上多层变形子场的融合,而忽略了特征编码器对网络性能的影响;另一个是缺乏针对不同尺度特征图特性的专门设计。为此,我们提出了一种创新的混合Transformer与卷积迭代优化金字塔网络,用于大变形脑图像配准。具体而言,设计了四种编码器变体来研究不同结构对金字塔配准网络性能的影响。其次,将Swin-Transformer模块与卷积迭代策略相结合,并根据不同解码层的语义信息特征对解码器的每一层进行精心设计。在三个公开的脑磁共振成像数据集上的大量实验结果表明,与9种前沿配准方法相比,我们的方法具有最高的配准精度,充分验证了我们模型设计的有效性和应用潜力。

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本文引用的文献

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DeepAtlas: Joint Semi-Supervised Learning of Image Registration and Segmentation.深度图谱:图像配准与分割的联合半监督学习
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Recursive Deformable Pyramid Network for Unsupervised Medical Image Registration.递归可变形金字塔网络用于无监督医学图像配准。
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BIRGU Net: deformable brain magnetic resonance image registration using gyral-net map and 3D Res-Unet.BIRGU网络:使用脑回网络地图和3D Res-Unet的可变形脑磁共振图像配准
Med Biol Eng Comput. 2023 Feb;61(2):579-592. doi: 10.1007/s11517-022-02725-7. Epub 2022 Dec 24.
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Dual attention network for unsupervised medical image registration based on VoxelMorph.基于 VoxelMorph 的无监督医学图像配准的双重注意网络。
Sci Rep. 2022 Sep 28;12(1):16250. doi: 10.1038/s41598-022-20589-7.
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IEEE J Biomed Health Inform. 2022 Oct;26(10):5130-5141. doi: 10.1109/JBHI.2022.3189696. Epub 2022 Oct 4.
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Dual-stream pyramid registration network.双流金字塔配准网络。
Med Image Anal. 2022 May;78:102379. doi: 10.1016/j.media.2022.102379. Epub 2022 Feb 18.
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Unsupervised 3D End-to-End Medical Image Registration With Volume Tweening Network.无监督的 3D 端到端医学图像配准方法,采用体素插值网络。
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BIRNet: Brain image registration using dual-supervised fully convolutional networks.BIRNet:使用双监督全卷积网络的脑图像配准
Med Image Anal. 2019 May;54:193-206. doi: 10.1016/j.media.2019.03.006. Epub 2019 Mar 22.