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慢性足部溃疡生物膜产生临床分离株的全球转录组学特征洞察

Insights into global transcriptomic profile of biofilm producing clinical isolates from chronic foot ulcers.

作者信息

Ebineshan Kumar, Srikantam Aparna, Pallapati Michael Sukumar

机构信息

Department of Microbiology, LEPRA - Society, Blue Peter Public Health and Research Centre, Hyderabad, India.

Department of Microbiology, Malla Reddy Medical College for Women, Hyderabad, India.

出版信息

Iran J Microbiol. 2025 Apr;17(2):211-219. doi: 10.18502/ijm.v17i2.18394.

DOI:10.18502/ijm.v17i2.18394
PMID:40337687
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12053402/
Abstract

BACKGROUND AND OBJECTIVES

is one of the predominant biofilm producing pathogen in leprosy foot ulcer (LFU). The objective of this study was to identify the transcriptome profile through Next Generation Sequencing (NGS) approach in mature biofilm of leprosy foot ulcer isolate of

MATERIALS AND METHODS

A cross-sectional study was conducted from July 2019 to May 2022 and a total of twenty-seven isolates were collected from the foot ulcers of leprosy patients. All isolates were screened for biofilm formation in vitro. Initially, two potential biofilm producing isolates and two planktonic cells were selected for transcriptome comparison.

RESULTS

With reference to transcriptome profile, out of 2,842 genes, 2,688 genes in mature biofilm and 2,685 genes in planktonic cells were expressed. Among them, forty-five differentially expressed genes with 32 and 13 genes showing up and down regulation respectively were obtained.

CONCLUSION

The research emphasizes the need for continued exploration into the mechanisms of biofilm formation by , particularly in the context of leprosy foot ulcers. Understanding these pathways not only aids in grasping the complexity of chronic infections but also paves the way for innovative therapeutic approaches aimed at mitigating biofilm-related complications in clinical settings.

摘要

背景与目的

[病原体名称未给出]是麻风足溃疡(LFU)中主要的生物膜产生病原体之一。本研究的目的是通过下一代测序(NGS)方法确定麻风足溃疡分离株成熟生物膜中的转录组图谱。

材料与方法

2019年7月至2022年5月进行了一项横断面研究,共从麻风患者的足部溃疡中收集了27株分离株。对所有分离株进行体外生物膜形成筛选。最初,选择了两株潜在的生物膜产生分离株和两株浮游细胞进行转录组比较。

结果

参照转录组图谱,在2842个基因中,成熟生物膜中有2688个基因表达,浮游细胞中有2685个基因表达。其中,获得了45个差异表达基因,分别有32个基因上调和13个基因下调。

结论

该研究强调了继续探索[病原体名称未给出]生物膜形成机制的必要性,特别是在麻风足溃疡的背景下。了解这些途径不仅有助于理解慢性感染的复杂性,也为旨在减轻临床环境中生物膜相关并发症的创新治疗方法铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/3257f17973a8/IJM-17-211-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/77c16826bb56/IJM-17-211-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/19cd8add198a/IJM-17-211-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/3257f17973a8/IJM-17-211-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/77c16826bb56/IJM-17-211-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/19cd8add198a/IJM-17-211-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/89a6/12053402/3257f17973a8/IJM-17-211-g003.jpg

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本文引用的文献

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PLoS One. 2025 Feb 11;20(2):e0315944. doi: 10.1371/journal.pone.0315944. eCollection 2025.
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Bacterial Persister Cells and Development of Antibiotic Resistance in Chronic Infections: An Update.细菌持留细胞与慢性感染中抗生素耐药性的产生:最新研究进展。
Br J Biomed Sci. 2024 Aug 7;81:12958. doi: 10.3389/bjbs.2024.12958. eCollection 2024.
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Prevalence of plantar ulcer and its risk factors in leprosy: a systematic review and meta-analysis.
麻风足底溃疡的患病率及其危险因素:系统评价和荟萃分析。
J Foot Ankle Res. 2023 Nov 13;16(1):77. doi: 10.1186/s13047-023-00674-4.
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Inactivation of Staphylococcus aureus by Levulinic Acid Plus Sodium Dodecyl Sulfate and their Antibacterial Mechanisms on S. aureus Biofilms by Transcriptomic Analysis.戊二酸联合十二烷基硫酸钠对金黄色葡萄球菌的灭活作用及其对金黄色葡萄球菌生物膜的转录组学分析抗菌机制。
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Transcriptome sequencing reveals the difference in the expression of biofilm and planktonic cells between two strains of Typhimurium.转录组测序揭示了两株鼠伤寒沙门氏菌生物膜细胞和浮游细胞表达的差异。
Biofilm. 2022 Oct 8;4:100086. doi: 10.1016/j.bioflm.2022.100086. eCollection 2022 Dec.
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