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用于预测多发性骨髓瘤预后的新型NET相关基因特征的鉴定与构建

Identification and construction of a novel NET-related gene signature for predicting prognosis in multiple myeloma.

作者信息

Yan Haotian, Ding Yangyang, Dai Wenjie, Wang Huiping, Qin Hui, Zhai Zhimin, Tao Qianshan

机构信息

Department of Hematology, The Second Affiliated Hospital of Anhui Medical University, Hefei, 230601, Anhui, China.

Center of Hematology Research, Anhui Medical University, Hefei, 230601, Anhui, China.

出版信息

Clin Exp Med. 2025 May 9;25(1):147. doi: 10.1007/s10238-025-01692-1.

Abstract

Neutrophil extracellular traps are essential in the development and advancement of multiple myeloma (MM). However, research investigating the prognostic value with NET-related genes (NRGs) in MM has been limited. Patient transcriptomic and clinical information was sourced from the gene expression omnibus database. Cox regression analysis with a univariate approach was employed to explore the link between NRGs and overall survival (OS). Kaplan-Meier methods were applied to assess variations in survival rates. A nomogram integrating clinical data and predictive risk metrics was crafted using multivariate logistic and Cox proportional risk model regression analyses. Additionally, we investigated the disparities in biological pathways, drug sensitivity, and immune cell involvement, and validated differential levels of two key genes through qPCR. We identified 148 differentially expressed NRGs through published articles, of which 14 were associated with prognosis in MM. Least absolute shrinkage and selection operator Cox regression model established a nine-gene NRG signature-comprising ANXA1, ANXA2, ENO1, HIF1A, HSPE1, LYZ, MCOLN3, THBD, and FN1-that demonstrated strong predictive power for patient survival. The Cox regression model with multiple variables demonstrated that the risk score independently predicted OS, showing that those with a high score had worse survival rates. Furthermore, a nomogram incorporating patient age, LDH levels, the International Staging System, and NRGs was developed, demonstrating strong prognostic prediction capabilities. Drug sensitivity correlation analysis also offered valuable guidance for future immuno-oncological therapies and drug selection in MM patients. The NRGs signature was a reliable biomarker for MM, effectively identifying high-risk patients and forecasting clinical outcomes.

摘要

中性粒细胞胞外陷阱在多发性骨髓瘤(MM)的发生和发展中至关重要。然而,关于MM中与中性粒细胞胞外陷阱相关基因(NRGs)的预后价值的研究一直有限。患者的转录组和临床信息来自基因表达综合数据库。采用单变量Cox回归分析来探索NRGs与总生存期(OS)之间的联系。应用Kaplan-Meier方法评估生存率的差异。使用多变量逻辑回归和Cox比例风险模型回归分析制作了一个整合临床数据和预测风险指标的列线图。此外,我们研究了生物学途径、药物敏感性和免疫细胞参与方面的差异,并通过qPCR验证了两个关键基因的差异水平。我们通过已发表的文章确定了148个差异表达的NRGs,其中14个与MM的预后相关。最小绝对收缩和选择算子Cox回归模型建立了一个由9个基因组成的NRG特征——包括膜联蛋白A1(ANXA1)、膜联蛋白A2(ANXA2)、烯醇化酶1(ENO1)、缺氧诱导因子1α(HIF1A)、热休克蛋白家族E成员1(HSPE1)、溶菌酶(LYZ)、黏蛋白型糖蛋白3(MCOLN3)、血栓调节蛋白(THBD)和纤连蛋白1(FN1)——对患者生存具有很强的预测能力。多变量Cox回归模型表明,风险评分可独立预测OS,表明评分高的患者生存率较差。此外,还开发了一个纳入患者年龄、乳酸脱氢酶(LDH)水平、国际分期系统和NRGs的列线图,显示出很强的预后预测能力。药物敏感性相关分析也为MM患者未来的免疫肿瘤治疗和药物选择提供了有价值的指导。NRGs特征是MM的可靠生物标志物,可有效识别高危患者并预测临床结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e6d/12064474/ef817da3d2fe/10238_2025_1692_Fig1_HTML.jpg

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