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偏离随机性:通过空间拉链形成进行自我分类的自我复制者的进化。

Departure from randomness: Evolution of self-replicators that can self-sort through steric zipper formation.

作者信息

Eleveld Marcel J, Wu Juntian, Liu Kai, Ottelé Jim, Markovitch Omer, Kiani Armin, Herold Lukas C, Lasorsa Alessia, van der Wel Patrick C A, Otto Sijbren

机构信息

Center for Systems Chemistry, Stratingh Institute, University of Groningen, Groningen, the Netherlands.

Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.

出版信息

Chem. 2025 May 8;11(5):None. doi: 10.1016/j.chempr.2024.11.012.

Abstract

Darwinian evolution of self-replicating entities most likely played a key role in the emergence of life from inanimate matter. For evolution to occur, self-replicators must (1) have structural space accessible to them, (2) occupy only part of it at any time, and (3) navigate it through mutation and selection. We describe a system of self-replicating hexameric macrocycles formed upon the mixing of two building blocks and occupying a subset of possible sequences. Specific interactions, most likely through steric zipper formation, favor a hexamer sequence where the two blocks alternate. Under different replication-destruction regimes, distinct replicator mutants are selected. With non-selective destruction (via outflow), the fastest replicators dominate. With chemically mediated, selective destruction, a mutant that balances replication speed and resistance to reduction by steric zipper formation becomes dominant. This system demonstrates a rudimentary form of Darwinian evolution, where replicators adapt to changing selection pressures through mutation and selection.

摘要

自我复制实体的达尔文式进化很可能在生命从无生命物质中出现的过程中发挥了关键作用。为了实现进化,自我复制者必须:(1)拥有可供其利用的结构空间;(2)在任何时候只占据其中一部分;(3)通过突变和选择在该空间中进行演变。我们描述了一种自我复制的六聚体大环系统,它由两种构件混合形成,占据了可能序列的一个子集。特定的相互作用,很可能是通过空间拉链的形成,有利于一种两个构件交替排列的六聚体序列。在不同的复制 - 破坏机制下,会选择出不同的复制者突变体。在非选择性破坏(通过流出)的情况下,复制速度最快的复制者占主导地位。在化学介导的选择性破坏情况下,一种通过空间拉链形成平衡复制速度和抗降解能力的突变体成为主导。这个系统展示了达尔文式进化的一种基本形式,即复制者通过突变和选择适应不断变化的选择压力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75a2/12062194/f6b7c1bf6275/fx1.jpg

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