Bertrand Brandt, Munoz-Garay Carlos
Instituto de Ciencias Físicas (ICF), Universidad Nacional Autónoma de México (UNAM), Avenida Universidad 2001, Chamilpa, 62210 Cuernavaca, Morelos México.
Biophys Rev. 2025 Apr 12;17(2):605-625. doi: 10.1007/s12551-025-01312-y. eCollection 2025 Apr.
The application of membrane-active antimicrobial peptides (AMPs) is considered to be a viable alternative to conventional antibiotics for treating infections caused by multidrug-resistant pathogenic microorganisms. In vitro and in silico biophysical approaches are indispensable for understanding the underlying molecular mechanisms of membrane-active AMPs. Lipid bilayer models are widely used to mimic and study the implication of various factors affecting these bio-active molecules, and their relationship with the physical parameters of the different membranes themselves. The quality and resemblance of these models to their target is crucial for elucidating how these AMPs work. Unfortunately, over the last few decades, no notable efforts have been made to improve or refine membrane mimetics, as it pertains to the elucidation of AMPs molecular mechanisms. In this review, we discuss the importance of improving the quality and resemblance of target membrane models, in terms of lipid composition and distribution, which ultimately directly influence physical parameters such as charge, fluidity, and thickness. In conjunction, membrane and peptide properties determine the global effect of selectivity, activity, and potency. It is therefore essential to define these interactions, and to do so, more refined lipid models are necessary. In this review, we focus on the significant advancements in promoting biomimetic membranes that closely resemble native ones, for which thorough biophysical characterization is key. This includes utilizing more complex lipid compositions that mimic various cell types. Additionally, we discuss important considerations to be taken into account when working with more complex systems.
膜活性抗菌肽(AMPs)的应用被认为是治疗由多重耐药病原微生物引起的感染的传统抗生素的可行替代方案。体外和计算机模拟生物物理方法对于理解膜活性抗菌肽的潜在分子机制不可或缺。脂质双层模型被广泛用于模拟和研究影响这些生物活性分子的各种因素的影响,以及它们与不同膜自身物理参数的关系。这些模型与目标的质量和相似性对于阐明这些抗菌肽的作用方式至关重要。不幸的是,在过去几十年里,在改进或完善与阐明抗菌肽分子机制相关的膜模拟物方面没有做出显著努力。在这篇综述中,我们讨论了在脂质组成和分布方面提高目标膜模型的质量和相似性的重要性,这最终直接影响诸如电荷、流动性和厚度等物理参数。同时,膜和肽的性质决定了选择性、活性和效力的整体效果。因此,定义这些相互作用至关重要,而要做到这一点,需要更精细的脂质模型。在这篇综述中,我们关注在促进与天然膜非常相似的仿生膜方面的重大进展,对此进行全面的生物物理表征是关键。这包括使用模仿各种细胞类型的更复杂的脂质组成。此外,我们还讨论了在处理更复杂系统时需要考虑的重要因素。