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染色质特异性超敏位点在注射到非洲爪蟾卵母细胞中的非洲爪蟾组蛋白基因上组装。

Chromatin-specific hypersensitive sites are assembled on a Xenopus histone gene injected into Xenopus oocytes.

作者信息

Gargiulo G, Razvi F, Ruberti I, Mohr I, Worcel A

出版信息

J Mol Biol. 1985 Feb 5;181(3):333-49. doi: 10.1016/0022-2836(85)90223-2.

DOI:10.1016/0022-2836(85)90223-2
PMID:4039007
Abstract

A cloned histone H4 gene of Xenopus laevis is efficiently transcribed after injection into germinal vesicles of X. laevis oocytes. Deletion analyses indicate that less than 140 base-pairs of 5' flanking sequences and 50 base-pairs of 3' flanking sequences are required for efficient transcription of this gene in Xenopus oocytes. Chromatin footprint analysis by a direct end-label technique reveals discrete DNase I-hypersensitive and micrococcal nuclease-hypersensitive sites at the 5' and 3' boundaries of the gene, which bracket the transcribed region of this minichromosome. The specific chromatin structure assembled around this homologous gene, together with the finding that histone genes of Drosophila melanogaster are not assembled into specific nucleoprotein structures within Xenopus oocytes, strongly suggest that sequence-specific and species-specific factors may be responsible for generating the chromatin-specific hypersensitive sites at the boundaries of active genes.

摘要

非洲爪蟾的一个克隆组蛋白H4基因在注入非洲爪蟾卵母细胞的生发泡后能高效转录。缺失分析表明,该基因在非洲爪蟾卵母细胞中高效转录所需的5'侧翼序列少于140个碱基对,3'侧翼序列少于50个碱基对。通过直接末端标记技术进行的染色质足迹分析揭示了该基因5'和3'边界处离散的脱氧核糖核酸酶I超敏和微球菌核酸酶超敏位点,这些位点包围了这个微型染色体的转录区域。围绕这个同源基因组装的特定染色质结构,以及黑腹果蝇的组蛋白基因在非洲爪蟾卵母细胞中未组装成特定核蛋白结构这一发现,强烈表明序列特异性和物种特异性因素可能是在活性基因边界产生染色质特异性超敏位点的原因。

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1
Chromatin-specific hypersensitive sites are assembled on a Xenopus histone gene injected into Xenopus oocytes.染色质特异性超敏位点在注射到非洲爪蟾卵母细胞中的非洲爪蟾组蛋白基因上组装。
J Mol Biol. 1985 Feb 5;181(3):333-49. doi: 10.1016/0022-2836(85)90223-2.
2
The tissue-specific chicken histone H5 gene is transcribed with fidelity in Xenopus laevis oocytes.组织特异性鸡组蛋白H5基因在非洲爪蟾卵母细胞中能准确转录。
J Mol Biol. 1985 Feb 5;181(3):449-52. doi: 10.1016/0022-2836(85)90231-1.
3
Analysis of the chromatin assembled in germinal vesicles of Xenopus oocytes.非洲爪蟾卵母细胞生发泡中组装染色质的分析。
J Mol Biol. 1983 Nov 5;170(3):699-722. doi: 10.1016/s0022-2836(83)80128-4.
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Structure of the two distinct types of minichromosomes that are assembled on DNA injected in Xenopus oocytes.在非洲爪蟾卵母细胞中注入的DNA上组装的两种不同类型的微型染色体的结构。
Cell. 1985 Apr;40(4):923-32. doi: 10.1016/0092-8674(85)90352-6.
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Functional activity and chromatin configuration of SV40 enhancer injected in Xenopus laevis oocytes.注射到非洲爪蟾卵母细胞中的SV40增强子的功能活性和染色质构型
Nucleic Acids Res. 1985 Nov 25;13(22):8065-81. doi: 10.1093/nar/13.22.8065.
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Chromatin assembly in Xenopus oocytes: in vivo studies.非洲爪蟾卵母细胞中的染色质组装:体内研究
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Transcription of dinucleosomal templates.双核小体模板的转录
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Assembly of transcriptionally active chromatin in Xenopus oocytes requires specific DNA binding factors.非洲爪蟾卵母细胞中转录活性染色质的组装需要特定的DNA结合因子。
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Retinoid receptor-induced alteration of the chromatin assembled on a ligand-responsive promoter in Xenopus oocytes.维甲酸受体诱导非洲爪蟾卵母细胞中配体反应性启动子上组装的染色质发生改变。
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Formation of stable chromatin structures on the histone H4 gene during differentiation in Tetrahymena thermophila.嗜热四膜虫分化过程中组蛋白H4基因上稳定染色质结构的形成。
Mol Cell Biol. 1986 Aug;6(8):3014-7. doi: 10.1128/mcb.6.8.3014-3017.1986.

引用本文的文献

1
Understanding oligonucleotide-mediated inhibition of gene expression in Xenopus laevis oocytes.了解寡核苷酸介导的非洲爪蟾卵母细胞基因表达抑制作用。
Nucleic Acids Res. 2000 Mar 1;28(5):1154-61. doi: 10.1093/nar/28.5.1154.
2
Remodeling of regulatory nucleoprotein complexes on the Xenopus hsp70 promoter during meiotic maturation of the Xenopus oocyte.非洲爪蟾卵母细胞减数分裂成熟过程中,非洲爪蟾hsp70启动子上调节性核蛋白复合物的重塑。
EMBO J. 1997 Jul 16;16(14):4361-73. doi: 10.1093/emboj/16.14.4361.
3
Role of chromatin and Xenopus laevis heat shock transcription factor in regulation of transcription from the X. laevis hsp70 promoter in vivo.
染色质和非洲爪蟾热休克转录因子在体内对非洲爪蟾hsp70启动子转录调控中的作用。
Mol Cell Biol. 1995 Nov;15(11):6013-24. doi: 10.1128/MCB.15.11.6013.
4
The positive transcription factor of the 5S RNA gene proteolyses during direct exchange between 5S DNA sites.5S RNA基因的正向转录因子在5S DNA位点之间的直接交换过程中发生蛋白水解。
J Cell Biol. 1986 Sep;103(3):673-81. doi: 10.1083/jcb.103.3.673.
5
Partial purification of a nuclear protein that binds to the CCAAT box of the mouse alpha 1-globin gene.一种与小鼠α1-珠蛋白基因的CCAAT框结合的核蛋白的部分纯化。
Mol Cell Biol. 1986 Mar;6(3):821-32. doi: 10.1128/mcb.6.3.821-832.1986.
6
Promoter sequences required for transcription of Xenopus laevis histone genes in injected frog oocyte nuclei.非洲爪蟾组蛋白基因在注射的蛙卵母细胞核中转录所需的启动子序列。
Mol Cell Biol. 1988 Sep;8(9):3676-82. doi: 10.1128/mcb.8.9.3676-3682.1988.
7
Characterization of the repressed 5S DNA minichromosomes assembled in vitro with a high-speed supernatant of Xenopus laevis oocytes.用非洲爪蟾卵母细胞高速上清液体外组装的受抑制5S DNA微型染色体的表征
Mol Cell Biol. 1988 Oct;8(10):4257-69. doi: 10.1128/mcb.8.10.4257-4269.1988.
8
Histone and histone gene compilation and alignment update.组蛋白及组蛋白基因汇编与比对更新。
Nucleic Acids Res. 1991 Apr 25;19 Suppl(Suppl):2173-88. doi: 10.1093/nar/19.suppl.2173.