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基因组学为双侧对称动物祖先的视蛋白库带来新见解,并提示异涡虫纲中存在微绒毛型光转导。

Genomics Sheds New Light on the Ancestral Bilaterian Opsin Repertoire and Suggests Rhabdomeric Phototransduction in Xenacoelomorpha.

作者信息

Abalde Samuel, Jondelius Ulf

机构信息

Department of Zoology, Swedish Museum of Natural History, Stockholm, Sweden.

出版信息

Genome Biol Evol. 2025 Apr 30;17(5). doi: 10.1093/gbe/evaf078.

Abstract

Animals use opsins, light-sensing, transmembrane proteins, to detect light, which is then converted into an electrical stimulus in the photoreceptors through a process known as phototransduction. The steady generation of genomic data has facilitated the description of the opsin diversity and photoreceptor activity in different animals. However, Xenacoelomorpha still represents an important gap in our understanding of opsin evolution from early animals. Characterized by extreme morphological simplicity, some Xenacoelomorpha present ocelli, eyespots, and even eyes with lenses, but no ciliary or rhabdomeric photoreceptors have been described. Here, we have leveraged all available genomic data from this group to characterize their opsin repertoire and to annotate the genes involved in the two main phototransduction cascades, ciliary and rhabdomeric, in these worms. Only six opsin types were found in Xenacoelomorpha, with no more than three in any given species. Among them, we annotated Anthozoa I, insofar thought to be cnidarian-specific, and another one specific to xenacoelomorphs. Despite their enigmatic position in the animal tree, we extended these findings to other animals, evaluating the two main phylogenetic hypotheses-the Nephrozoa and Xenambulacraria hypotheses. We propose that the opsin repertoire of the ancestral bilaterian was composed of either seven opsins or 11, depending on the phylogenetic hypothesis, and not nine as previously suggested. We argue that the Nephrozoa hypothesis explains opsin evolution more parsimoniously than the alternative Xenambulacraria hypothesis. Furthermore, our data also suggest that despite the lack of the typical rhabdomeric or ciliary photoreceptors, xenacoelomorphs use rhabdomeric phototransduction.

摘要

动物利用视蛋白(一种光敏感的跨膜蛋白)来检测光线,然后通过一个称为光转导的过程,将光线在光感受器中转化为电刺激。基因组数据的不断产生有助于描述不同动物的视蛋白多样性和光感受器活性。然而,异涡虫纲在我们对早期动物视蛋白进化的理解中仍然是一个重要的空白。一些异涡虫纲动物以极端简单的形态为特征,它们具有单眼、眼点,甚至有晶状体的眼睛,但尚未发现有纤毛或微绒毛光感受器。在这里,我们利用了该类群所有可用的基因组数据,来表征它们的视蛋白库,并注释这些蠕虫中参与两种主要光转导级联反应(纤毛和微绒毛)的基因。在异涡虫纲中仅发现了六种视蛋白类型,任何一个给定物种中的视蛋白类型都不超过三种。其中,我们注释了迄今为止被认为是刺胞动物特有的珊瑚虫视蛋白I型,以及另一种异涡虫纲特有的视蛋白。尽管它们在动物谱系中的位置神秘,但我们将这些发现扩展到了其他动物,评估了两种主要的系统发育假说——肾管动物假说和异胚层动物假说。我们提出,根据系统发育假说,两侧对称动物祖先的视蛋白库由七种或十一种视蛋白组成,而不是之前所认为的九种。我们认为,肾管动物假说比另一种异胚层动物假说能更简洁地解释视蛋白的进化。此外,我们的数据还表明,尽管异涡虫纲缺乏典型的微绒毛或纤毛光感受器,但它们仍使用微绒毛光转导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c3c/12104807/3a9b647bccf6/evaf078f1.jpg

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