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综合分析揭示代谢功能障碍相关脂肪性肝病中PAN细胞焦亡相关基因的分子特征和免疫浸润

Comprehensive Analysis Reveals the Molecular Features and Immune Infiltration of PANoptosis-Related Genes in Metabolic Dysfunction-Associated Steatotic Liver Disease.

作者信息

Huang Yan, Qian Jingyu, Luan Zhengyun, Han Junling, Tang Limin

机构信息

Medical College, Yangzhou University, Yangzhou 225000, China.

Taizhou School of Clinical Medicine, The Affiliated Taizhou People's Hospital of Nanjing Medical University, Taizhou 225300, China.

出版信息

Biology (Basel). 2025 May 8;14(5):518. doi: 10.3390/biology14050518.

DOI:10.3390/biology14050518
PMID:40427707
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12108815/
Abstract

BACKGROUND

Metabolic dysfunction-associated steatotic liver disease (MASLD), a chronic inflammatory disorder characterized by alcohol-independent hepatic lipid accumulation, remains poorly understood in terms of PANoptosis involvement.

METHODS

We integrated high-throughput sequencing data with bioinformatics to profile differentially expressed genes (DEGs) and immune infiltration patterns in MASLD, identifying PANoptosis-associated DEGs (PANoDEGs). Machine learning algorithms prioritized key PANoDEGs, while ROC curves assessed their diagnostic efficacy. Cellular, animal, and clinical validations confirmed target expression.

RESULTS

Three PANoDEGs (SNHG16, Caspase-6, and Dynamin-1-like protein) exhibited strong MASLD associations and diagnostic significance. Immune profiling revealed elevated M1 macrophages, naïve B cells, and activated natural killer cells in MASLD tissues versus controls. Further experiments verified the expression of the key PANoDEGs.

CONCLUSIONS

This study provides new insights for further studies on the pathogenesis and treatment strategies of PANoptosis in MASLD.

摘要

背景

代谢功能障碍相关脂肪性肝病(MASLD)是一种以非酒精性肝脂质蓄积为特征的慢性炎症性疾病,目前对其细胞焦亡参与情况的了解仍很有限。

方法

我们将高通量测序数据与生物信息学相结合,以分析MASLD中差异表达基因(DEG)和免疫浸润模式,识别与细胞焦亡相关的DEG(PANoDEG)。机器学习算法对关键的PANoDEG进行优先级排序,同时通过ROC曲线评估其诊断效能。细胞、动物和临床验证确认了靶标表达。

结果

三个PANoDEG(SNHG16、半胱天冬酶-6和动力蛋白样蛋白1)与MASLD有很强的相关性且具有诊断意义。免疫分析显示,与对照组相比,MASLD组织中的M1巨噬细胞、幼稚B细胞和活化自然杀伤细胞增多。进一步实验验证了关键PANoDEG的表达。

结论

本研究为进一步研究细胞焦亡在MASLD发病机制和治疗策略方面提供了新见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/2e68a7e0e2a6/biology-14-00518-g006.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/2e68a7e0e2a6/biology-14-00518-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/fac9e9b986de/biology-14-00518-g003.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/edd78bcd5675/biology-14-00518-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/b5ea47f485dc/biology-14-00518-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/4a056f98bda5/biology-14-00518-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4bf0/12108815/2e68a7e0e2a6/biology-14-00518-g006.jpg

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本文引用的文献

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Human genetics of metabolic dysfunction-associated steatotic liver disease: from variants to cause to precision treatment.代谢功能障碍相关脂肪性肝病的人类遗传学:从变异到病因再到精准治疗
J Clin Invest. 2025 Apr 1;135(7):e186424. doi: 10.1172/JCI186424.
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Metabolic dysfunction-associated steatotic liver disease in adults.成人代谢功能障碍相关脂肪性肝病
Nat Rev Dis Primers. 2025 Mar 6;11(1):14. doi: 10.1038/s41572-025-00599-1.
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PANoptosis: a novel target for cardiovascular diseases.PANoptosis:心血管疾病的新靶点。
Trends Pharmacol Sci. 2024 Aug;45(8):739-756. doi: 10.1016/j.tips.2024.06.002. Epub 2024 Jul 12.
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Cell death shapes cancer immunity: spotlighting PANoptosis.细胞死亡塑造癌症免疫:聚焦 PANoptosis。
J Exp Clin Cancer Res. 2024 Jun 15;43(1):168. doi: 10.1186/s13046-024-03089-6.
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Decoding the role of immune T cells: A new territory for improvement of metabolic-associated fatty liver disease.解读免疫T细胞的作用:改善代谢相关脂肪性肝病的新领域。
Imeta. 2023 Jan 18;2(1):e76. doi: 10.1002/imt2.76. eCollection 2023 Feb.
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Identification of key markers for the stages of nonalcoholic fatty liver disease: An integrated bioinformatics analysis and experimental validation.非酒精性脂肪性肝病各阶段关键标志物的鉴定:整合生物信息学分析与实验验证。
Dig Liver Dis. 2024 Nov;56(11):1887-1896. doi: 10.1016/j.dld.2024.05.010. Epub 2024 Jun 1.
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Mechanism of lncRNA SNHG16 on kidney clear cell carcinoma cells by targeting miR-506-3p/ETS1/RAS/ERK molecular axis.长链非编码RNA SNHG16通过靶向miR-506-3p/ETS1/RAS/ERK分子轴对肾透明细胞癌细胞的作用机制
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