Cheng Jia, Yang Ling, Wang Shiping, Luo Kaiyong, Luo Senlin, Dong Yang, Ning Ya, Wang Weibin
College of Food Science and Technology, Yunnan Agricultural University, Kunming 650201, China.
Yunnan Provincial Key Laboratory of Biological Big Data, Yunnan Agricultural University, Kunming 650201, China.
Genes (Basel). 2025 Apr 23;16(5):477. doi: 10.3390/genes16050477.
: The gene family encodes secreted glycoproteins that are rich in cysteine, which generally serve as activators of the Wnt signaling pathway in animals. Four types of this family have been identified in a few model species. However, the evolution of the family remains unclear. : In this study, we identified a total of 1496 RSPO homologs through an extensive survey of the genes in 430 animals. Gene family clustering and phylogenetic analysis identified four major subtypes of the family (RSPO1-RSPO4) and clarified their distribution of copy number in different species. : Members of the RSPO4 subfamily that were closest to ancestral forms existed in both Deuterostomes and Protostomates, and we speculate that representatives of this subfamily already existed in , the last common ancestor of Deuterostomes. Particularly, in some RSPO3 subtypes of Actinopterygii (ray-finned fishes), an FU repeated motif with three conserved cysteines was identified. Further conservative analysis of amino acids and alignment of tertiary protein structure revealed the potential functional sites for each subgroup. The results provide insight into the phylogenetic relationships and evolutionary patterns of conserved motifs of family genes in animal kingdoms, which will guide further studies on the biological functions of RSPO in other non-model species.
该基因家族编码富含半胱氨酸的分泌型糖蛋白,这些糖蛋白在动物中通常作为Wnt信号通路的激活剂。在一些模式物种中已鉴定出该家族的四种类型。然而,该家族的进化仍不清楚。
在本研究中,我们通过对430种动物的基因进行广泛调查,共鉴定出1496个RSPO同源物。基因家族聚类和系统发育分析确定了该家族的四个主要亚型(RSPO1 - RSPO4),并阐明了它们在不同物种中的拷贝数分布。
RSPO4亚家族中最接近祖先形式的成员存在于后口动物和原口动物中,我们推测该亚家族的代表在原口动物和后口动物的最后一个共同祖先——两侧对称动物中就已经存在。特别是,在硬骨鱼的一些RSPO3亚型中,鉴定出了一个具有三个保守半胱氨酸的FU重复基序。进一步的氨基酸保守性分析和蛋白质三级结构比对揭示了每个亚组的潜在功能位点。这些结果为动物王国中RSPO家族基因的系统发育关系和保守基序的进化模式提供了见解,这将指导对其他非模式物种中RSPO生物学功能的进一步研究。