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使用基于硅胶的移液器吸头柱进行无设备快速核酸提取。

Rapid Equipment-Free Nucleic Acid Extraction Using a Silica-Based Pipet Tip Column.

作者信息

Jung Chaewon, Kim Gyeohoon, Song Mun-Bum, Kim Min-Gon

机构信息

Department of Chemistry, School of Physics and Chemistry, Gwangju Institute of Science & Technology (GIST), 123 Cheomdan-gwagiro, Gwangju 61005, Republic of Korea.

GMD Biotech., 416, Research Institute of University Industry Cooperation, Gwangju Institute of Science & Technology (GIST), 123 Cheomdan-gwagiro, Gwangju 61005, Republic of Korea.

出版信息

ACS Omega. 2025 May 15;10(20):20427-20434. doi: 10.1021/acsomega.5c00573. eCollection 2025 May 27.

DOI:10.1021/acsomega.5c00573
PMID:40454035
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12120609/
Abstract

Nucleic acid extraction from clinical specimens is essential for accurate molecular diagnostic assays. However, conventional extraction methods are often slow, equipment-dependent, and require trained personnel, limiting the point-of-care applicability. We introduce a novel silica-based pipet tip column that enables rapid nucleic acid extraction from clinical samples in less than 3 min. The pipet tip column has a large surface area for effective nucleic acid extraction using chaotropic salts. The integrated disposable 1 mL syringe eliminates the need for a pipet. Sample application is achieved by simply pushing and pulling the syringe, requiring no external power or specialized equipment. The pipet tip column performance was validated using standard influenza A and B, severe acute respiratory syndrome coronavirus-2, and Staphylococcus aureus samples, achieving high performance even at low concentrations (1 PFU/mL or 1 TCID/mL). Our approach demonstrated a 90-110% nucleic acid recovery rate, comparable to that of traditional methods. Pipette tip-column nucleic acid extraction was successful for nasopharyngeal and saliva samples, including those in loop-mediated isothermal amplification assays. The pipet tip column provides a rapid, cost-effective, reliable, and portable solution for on-site molecular diagnostics. Additionally, nonexpert users can perform nucleic acid extraction without sample transportation or storage, reducing contamination risks and operational costs.

摘要

从临床样本中提取核酸对于准确的分子诊断检测至关重要。然而,传统的提取方法往往速度慢、依赖设备且需要训练有素的人员,限制了即时检测的适用性。我们推出了一种新型的基于硅胶的移液器吸头柱,可在不到3分钟的时间内从临床样本中快速提取核酸。该移液器吸头柱具有较大的表面积,可使用离液盐有效地提取核酸。集成的一次性1 mL注射器无需移液器。通过简单地推拉注射器即可实现样品加样,无需外部电源或专用设备。使用甲型和乙型流感标准毒株、严重急性呼吸综合征冠状病毒2以及金黄色葡萄球菌样本对移液器吸头柱的性能进行了验证,即使在低浓度(1 PFU/mL或1 TCID/mL)下也能实现高性能。我们的方法显示核酸回收率为90%至110%,与传统方法相当。移液器吸头柱核酸提取对于鼻咽和唾液样本(包括那些用于环介导等温扩增检测的样本)是成功的。该移液器吸头柱为现场分子诊断提供了一种快速、经济高效、可靠且便携的解决方案。此外,非专业用户无需运输或储存样本即可进行核酸提取,降低了污染风险和运营成本。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/ea7457c4b2b4/ao5c00573_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/15977c463877/ao5c00573_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/49e8ff0420f7/ao5c00573_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/bc1b0cd0db54/ao5c00573_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/30333a40d383/ao5c00573_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/5139d3b05927/ao5c00573_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/ea7457c4b2b4/ao5c00573_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/15977c463877/ao5c00573_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/49e8ff0420f7/ao5c00573_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/bc1b0cd0db54/ao5c00573_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/30333a40d383/ao5c00573_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/5139d3b05927/ao5c00573_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11c4/12120609/ea7457c4b2b4/ao5c00573_0006.jpg

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一种基于逆转录环介导等温扩增的即时 SARS-CoV-2 检测方法,无需 RNA 提取,具有与 RT-PCR 相当的诊断性能。
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