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评估彗星芯片技术在非模式物种DNA损伤研究中的应用:海龟和哺乳动物中不同的紫外线诱导反应。

Assessing CometChip technology for DNA damage studies in non-model species: distinct UV-induced responses in turtles and mammals.

作者信息

Bulls Stephanie E, Finn Elijah, Sykora Peter, Lynch Vincent J, Pramanik Paramahansa, Glaberman Scott, Chiari Ylenia

机构信息

Centre for Environmental Research and Justice, School of Biosciences, University of Birmingham, Birmingham, UK.

Amelia Technologies, Washington D.C., USA.

出版信息

BMC Res Notes. 2025 Jun 2;18(1):243. doi: 10.1186/s13104-025-07285-1.

Abstract

OBJECTIVE

We evaluated the feasibility of using the high-throughput CometChip to assess DNA damage in non-model species. Specifically, we measured UVA-induced damage in fibroblasts from five turtle and four mammalian species with diverse life histories and cancer rates.

RESULTS

Turtles exhibited significantly higher endogenous DNA damage than mammals but showed lower UVA-induced damage after both 2-min and 5-min exposures. At 5 min, bats exhibited the most DNA damage (21.3%), followed by mice (11.3%). Elephants showed intermediate responses (Asian: 6.49%, African: 3.58%), while all turtles remained below 3%, suggesting resilience to oxidative stress. Despite the assay's ability to detect DNA damage across species, several challenges emerged. Endogenous damage varied widely both within and between species. Differences in culture requirements between turtles and mammals limited experimental standardization. Additionally, characterizing species-specific responses is challenging, as multiple cell lines per species are often unavailable for non-model organisms, making it difficult to account for intraspecific variation. Addressing these limitations will be crucial for conducting robust comparative studies of DNA damage responses in future research.

摘要

目的

我们评估了使用高通量彗星芯片评估非模式物种DNA损伤的可行性。具体而言,我们测量了来自五种龟类和四种具有不同生活史和癌症发生率的哺乳动物物种的成纤维细胞中紫外线A诱导的损伤。

结果

龟类表现出比哺乳动物显著更高的内源性DNA损伤,但在暴露2分钟和5分钟后,其紫外线A诱导的损伤较低。在5分钟时,蝙蝠表现出的DNA损伤最多(21.3%),其次是小鼠(11.3%)。大象表现出中等反应(亚洲象:6.49%,非洲象:3.58%),而所有龟类的损伤均低于3%,表明其对氧化应激具有抗性。尽管该检测方法能够检测不同物种的DNA损伤,但仍出现了一些挑战。内源性损伤在物种内部和物种之间差异很大。龟类和哺乳动物在培养要求上的差异限制了实验的标准化。此外,由于对于非模式生物来说,每个物种通常没有多个细胞系,因此难以考虑种内变异,所以表征物种特异性反应具有挑战性。在未来的研究中,解决这些限制对于进行可靠的DNA损伤反应比较研究至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/028b/12131362/a969326b2e6a/13104_2025_7285_Fig1_HTML.jpg

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