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HIV-1 衣壳粒的中央孔促进病毒衣壳的持续稳定性。

The central pore of HIV-1 capsomers promotes sustained stability of the viral capsid.

作者信息

Kleinpeter Alex B, Mallery Donna L, Albecka Anna, Burdick Ryan C, Renner Nadine, Klarhof J Ole, Vamos Boglarka, Pathak Vinay K, James Leo C, Freed Eric O

机构信息

Virus-Cell Interaction Section, HIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702-1201, USA.

Medical Research Council Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge, CB2 0QH, UK.

出版信息

bioRxiv. 2025 May 19:2025.05.19.654868. doi: 10.1101/2025.05.19.654868.

DOI:10.1101/2025.05.19.654868
PMID:40475674
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12139970/
Abstract

The HIV-1 capsid, which orchestrates several key post-entry events to facilitate infection in target cells, is composed of hexamers and pentamers (capsomers) of the capsid (CA) protein arranged in a closed, conical structure known as the capsid that protects the viral RNA genome and replicative enzymes reverse transcriptase (RT) and integrase (IN). Each capsomer contains a central pore lined with rings of positively charged amino acid side chains - Arg-18 (R18) and Lys-25 (K25). The R18 and K25 rings drive capsid assembly by binding the host polyanion inositol hexakisphosphate (IP6) and are proposed to mediate the import of dNTPs into the capsid to facilitate reverse transcription. Here we demonstrate that the R18 ring can be functionally replaced by the introduction of a mutation (N21K) that establishes a new electropositive ring within the central pore. In contrast with previous studies in which R18 mutants were unable to adapt in culture, the N21K mutation facilitated the acquisition of second-site compensatory mutations that restored near-WT fitness to viral mutants lacking the R18 ring. Comparative analysis of several central pore mutants lacking the R18 ring revealed that particle infectivity was not correlated with IP6 binding or capsid assembly, but rather with capsid stability and key post-entry events including reverse transcription and nuclear entry. Our results indicate that the central pore plays critical roles in both the assembly of capsids and their sustained stability post-entry.

摘要

HIV-1衣壳由衣壳(CA)蛋白的六聚体和五聚体(衣壳粒)组成,呈封闭的锥形结构,即衣壳,它协调几个关键的进入后事件以促进在靶细胞中的感染,保护病毒RNA基因组以及复制酶逆转录酶(RT)和整合酶(IN)。每个衣壳粒都包含一个中心孔,孔内衬有带正电荷的氨基酸侧链环——精氨酸-18(R18)和赖氨酸-25(K25)。R18和K25环通过结合宿主多阴离子肌醇六磷酸(IP6)驱动衣壳组装,并被认为介导脱氧核苷三磷酸(dNTPs)进入衣壳以促进逆转录。在这里,我们证明通过引入一个突变(N21K)可以在功能上替代R18环,该突变在中心孔内建立了一个新的电正性环。与之前R18突变体无法在培养中适应的研究不同,N21K突变促进了第二位点补偿性突变的获得,这些突变使缺乏R18环的病毒突变体恢复到接近野生型的适应性。对几个缺乏R18环的中心孔突变体的比较分析表明,颗粒感染性与IP6结合或衣壳组装无关,而是与衣壳稳定性以及包括逆转录和核进入在内的关键进入后事件有关。我们的结果表明,中心孔在衣壳组装及其进入后持续稳定性方面都起着关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4e59e79efd48/nihpp-2025.05.19.654868v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/ea546f078d9a/nihpp-2025.05.19.654868v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/8cb91e2fae83/nihpp-2025.05.19.654868v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/8b3b5ad81626/nihpp-2025.05.19.654868v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4592af97e025/nihpp-2025.05.19.654868v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4722f228dbe5/nihpp-2025.05.19.654868v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4e59e79efd48/nihpp-2025.05.19.654868v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/ea546f078d9a/nihpp-2025.05.19.654868v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/8cb91e2fae83/nihpp-2025.05.19.654868v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/8b3b5ad81626/nihpp-2025.05.19.654868v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4592af97e025/nihpp-2025.05.19.654868v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4722f228dbe5/nihpp-2025.05.19.654868v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92a7/12139970/4e59e79efd48/nihpp-2025.05.19.654868v1-f0006.jpg

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本文引用的文献

1
Kinetic implications of IP anion binding on the molecular switch of HIV-1 capsid assembly.IP阴离子结合对HIV-1衣壳组装分子开关的动力学影响
Sci Adv. 2025 Apr 18;11(16):eadt7818. doi: 10.1126/sciadv.adt7818. Epub 2025 Apr 16.
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Cell-free assays reveal that the HIV-1 capsid protects reverse transcripts from cGAS immune sensing.无细胞分析表明,HIV-1衣壳可保护逆转录产物免受cGAS免疫识别。
PLoS Pathog. 2025 Jan 28;21(1):e1012206. doi: 10.1371/journal.ppat.1012206. eCollection 2025 Jan.
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HIV-1 adapts to lost IP6 coordination through second-site mutations that restore conical capsid assembly.
HIV-1 通过第二部位突变适应失去的 IP6 配位,从而恢复锥形衣壳组装。
Nat Commun. 2024 Sep 13;15(1):8017. doi: 10.1038/s41467-024-51971-w.
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The HIV-1 capsid serves as a nanoscale reaction vessel for reverse transcription.HIV-1 衣壳作为纳米级别的逆转录反应容器。
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Arg18 Substitutions Reveal the Capacity of the HIV-1 Capsid Protein for Non-Fullerene Assembly.Arg18 取代揭示了 HIV-1 衣壳蛋白的非富勒烯组装能力。
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HIV-1 capsid stability and reverse transcription are finely balanced to minimize sensing of reverse transcription products the cGAS-STING pathway.HIV-1 衣壳稳定性和逆转录过程精细平衡,以最小化逆转录产物被 cGAS-STING 途径感知。
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Capsid-host interactions for HIV-1 ingress.HIV-1 进入的衣壳-宿主相互作用。
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