• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于图神经网络方法的几何引导与定向静电策略相结合用于纳米团簇结构预测

Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction.

作者信息

Nandy Sridatri, Jose K V Jovan

机构信息

Advanced Artificial Intelligence Theoretical and Computational Chemistry Laboratory, School of Chemistry, University of Hyderabad, Hyderabad 500046, Telangana, India.

出版信息

J Phys Chem A. 2025 Jun 26;129(25):5671-5682. doi: 10.1021/acs.jpca.5c02284. Epub 2025 Jun 13.

DOI:10.1021/acs.jpca.5c02284
PMID:40509917
Abstract

We introduce the Geometric-DESIGNN method, which integrates Geometric Guidance with Directed Electrostatics Strategy within a Graph Neural Network framework to predict the stable configuration of nanoclusters on their potential energy surfaces. This approach merges the geometric and electronic strategies using graph neural network-based models to predict structures of large atomic clusters with specific size and point-group symmetries. This approach aids in constructing atomic metal cluster structures by predicting building frames through a geometric approach and locating the minima in the molecular electrostatic potential (MESP) landscape. By following alternate geometric and DESIGNN building strategies for each shell of parent clusters, we efficiently achieve close-packed daughter structures along their evolutionary paths. The geometric-DESIGNN approach is validated on the prototype Mg clusters, by building structures for sizes up to < 561. Furthermore, constraining the point-group symmetry of the parent clusters, we identify new symmetric isomers of medium to large Mg clusters with < 150. This methodology is also employed to construct stable Mg nanoclusters with = 332, 338, and 561. Benchmarking results show that the geometric-DESIGNN approach is an efficient tool for accelerated prediction of the nanocluster structure.

摘要

我们介绍了几何-DESIGNN方法,该方法在图神经网络框架内将几何引导与定向静电策略相结合,以预测纳米团簇在其势能面上的稳定构型。这种方法使用基于图神经网络的模型融合几何和电子策略,以预测具有特定尺寸和点群对称性的大型原子团簇的结构。该方法通过几何方法预测构建框架并定位分子静电势(MESP)景观中的最小值,有助于构建原子金属团簇结构。通过对母团簇的每个壳层遵循交替的几何和DESIGNN构建策略,我们沿着它们的演化路径有效地实现了密堆积的子结构。几何-DESIGNN方法在原型镁团簇上得到了验证,构建了尺寸高达<561的结构。此外,通过约束母团簇的点群对称性,我们识别出了<150的中大型镁团簇的新对称异构体。该方法还用于构建具有=332、338和561的稳定镁纳米团簇。基准测试结果表明,几何-DESIGNN方法是加速预测纳米团簇结构的有效工具。

相似文献

1
Geometric Guidance Integrated with Directed Electrostatics Strategy within a Graph Neural Network Approach for Nanocluster Structure Prediction.基于图神经网络方法的几何引导与定向静电策略相结合用于纳米团簇结构预测
J Phys Chem A. 2025 Jun 26;129(25):5671-5682. doi: 10.1021/acs.jpca.5c02284. Epub 2025 Jun 13.
2
Directed Electrostatics Strategy Integrated as a Graph Neural Network Approach for Accelerated Cluster Structure Prediction.作为一种用于加速簇结构预测的图神经网络方法集成的定向静电策略。
J Chem Theory Comput. 2025 Jan 28;21(2):978-990. doi: 10.1021/acs.jctc.4c01257. Epub 2025 Jan 15.
3
Immunogenicity and seroefficacy of pneumococcal conjugate vaccines: a systematic review and network meta-analysis.肺炎球菌结合疫苗的免疫原性和血清效力:系统评价和网络荟萃分析。
Health Technol Assess. 2024 Jul;28(34):1-109. doi: 10.3310/YWHA3079.
4
Stigma Management Strategies of Autistic Social Media Users.自闭症社交媒体用户的污名管理策略
Autism Adulthood. 2025 May 28;7(3):273-282. doi: 10.1089/aut.2023.0095. eCollection 2025 Jun.
5
Signs and symptoms to determine if a patient presenting in primary care or hospital outpatient settings has COVID-19.在基层医疗机构或医院门诊环境中,如果患者出现以下症状和体征,可判断其是否患有 COVID-19。
Cochrane Database Syst Rev. 2022 May 20;5(5):CD013665. doi: 10.1002/14651858.CD013665.pub3.
6
Cost-effectiveness of using prognostic information to select women with breast cancer for adjuvant systemic therapy.利用预后信息为乳腺癌患者选择辅助性全身治疗的成本效益
Health Technol Assess. 2006 Sep;10(34):iii-iv, ix-xi, 1-204. doi: 10.3310/hta10340.
7
Biomarkers as point-of-care tests to guide prescription of antibiotics in people with acute respiratory infections in primary care.生物标志物作为即时检测手段,指导初级保健中急性呼吸道感染患者使用抗生素的处方。
Cochrane Database Syst Rev. 2022 Oct 17;10(10):CD010130. doi: 10.1002/14651858.CD010130.pub3.
8
WITHDRAWN: Interventions for fatigue and weight loss in adults with advanced progressive illness.撤回:针对晚期进行性疾病成人患者疲劳和体重减轻的干预措施。
Cochrane Database Syst Rev. 2017 Apr 7;4(4):CD008427. doi: 10.1002/14651858.CD008427.pub3.
9
Beds, overlays and mattresses for preventing and treating pressure ulcers: an overview of Cochrane Reviews and network meta-analysis.预防和治疗压疮的床、垫板和床垫:Cochrane 综述和网络荟萃分析概述。
Cochrane Database Syst Rev. 2021 Aug 16;8(8):CD013761. doi: 10.1002/14651858.CD013761.pub2.
10
Dressings and topical agents for treating pressure ulcers.用于治疗压疮的敷料和外用剂。
Cochrane Database Syst Rev. 2017 Jun 22;6(6):CD011947. doi: 10.1002/14651858.CD011947.pub2.