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病毒蛋白的体外液-液相分离测定

In Vitro Liquid-Liquid Phase Separation Assay for Viral Proteins.

作者信息

Hu Meilin, Liu Xiaoqing, Liang Taizhen, Zheng Chunfu, Ma Xiancai

机构信息

Guangzhou National Laboratory, Guangzhou International Bio-Island, Guangzhou, China.

State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China.

出版信息

Methods Mol Biol. 2025;2940:63-78. doi: 10.1007/978-1-0716-4615-1_7.

DOI:10.1007/978-1-0716-4615-1_7
PMID:40515902
Abstract

In recent years, numerous membraneless condensates have been found to regulate cellular and viral processes. These condensates are mainly composed of specific proteins with liquid-liquid phase separation (LLPS) properties. Many studies have revealed that these membraneless organelles efficiently promote viral infection, replication, assembly, and latency, demonstrating their druggable potential by targeting LLPS. In vitro LLPS assays have been widely used to characterize the biophysical properties and study the biochemical functions of phase-separated proteins. By simulating the intracellular environment, these assays can elucidate how cellular or viral proteins form dynamically reversible condensates via LLPS. Here, we describe the procedure of the in vitro LLPS assay for viral proteins, which can also be applied to study the LLPS properties of cellular proteins.

摘要

近年来,人们发现许多无膜凝聚物可调节细胞和病毒过程。这些凝聚物主要由具有液-液相分离(LLPS)特性的特定蛋白质组成。许多研究表明,这些无膜细胞器能有效促进病毒感染、复制、组装和潜伏,通过靶向LLPS显示出它们的可药物靶向潜力。体外LLPS分析已被广泛用于表征生物物理特性和研究相分离蛋白的生化功能。通过模拟细胞内环境,这些分析可以阐明细胞或病毒蛋白如何通过LLPS形成动态可逆的凝聚物。在这里,我们描述了用于病毒蛋白的体外LLPS分析方法,该方法也可用于研究细胞蛋白的LLPS特性。

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本文引用的文献

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TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.TRIM28 介导的核衣壳蛋白 SUMO 化增强了 SARS-CoV-2 的毒力。
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Coronavirus subverts ER-phagy by hijacking FAM134B and ATL3 into p62 condensates to facilitate viral replication.冠状病毒通过劫持 FAM134B 和 ATL3 进入 p62 凝聚物来颠覆内质网自噬,从而促进病毒复制。
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When liquid-liquid phase separation meets viral infections.
当液-液相分离遭遇病毒感染时。
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CBX4 contributes to HIV-1 latency by forming phase-separated nuclear bodies and SUMOylating EZH2.CBX4 通过形成相分离的核体和 SUMO 化 EZH2 促进 HIV-1 潜伏期。
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Phase separation drives RNA virus-induced activation of the NLRP6 inflammasome.相分离驱动 RNA 病毒诱导的 NLRP6 炎性体激活。
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Targeting liquid-liquid phase separation of SARS-CoV-2 nucleocapsid protein promotes innate antiviral immunity by elevating MAVS activity.靶向 SARS-CoV-2 核衣壳蛋白液-液相分离可通过提高 MAVS 活性促进先天抗病毒免疫。
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The STING phase-separator suppresses innate immune signalling.STING 相分离抑制剂抑制固有免疫信号转导。
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Histone chaperone CAF-1 promotes HIV-1 latency by leading the formation of phase-separated suppressive nuclear bodies.组蛋白伴侣 CAF-1 通过引导形成相分离的抑制性核体促进 HIV-1 潜伏。
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Phosphoregulation of Phase Separation by the SARS-CoV-2 N Protein Suggests a Biophysical Basis for its Dual Functions.新冠病毒 N 蛋白通过磷酸化调节液-液相分离,提示其双重功能的一种物理基础。
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Nucleocapsid protein of SARS-CoV-2 phase separates into RNA-rich polymerase-containing condensates.新型冠状病毒核衣壳蛋白相与富含 RNA 的聚合酶相分离形成凝聚物。
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