Zhang Huan, Jin Shi, Wang Hao, Li Fei, Zhong Zhaoshan, Guo Yang, Luo Jia, Ye Ziyun, Lian Chao, Wang Minxiao, Li Chaolun
Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, PR China.
University of Chinese Academy of Sciences, Beijing 100049, PR China.
Int J Syst Evol Microbiol. 2025 Jun;75(6). doi: 10.1099/ijsem.0.006818.
A novel Gram-negative, oxidase- and catalase-positive, rod-shaped bacterium, designated strain KX21116, was isolated from the mussel collected from a cold seep field in the South China Sea. Strain KX21116 grew optimally at 28 °C, pH 6.0 with 3% (w/v) NaCl, under aerobic and microaerobic conditions. Its genome size was 3.16 Mb, with a G+C content of 28.4 mol%. The 16S rRNA sequences revealed that strain KX21116 was closely related to DSM 7299 (98.77% gene sequence similarity) and AR-13 (95.58%). Phylogenetic and phylogenomic analysis revealed that strain KX21116 clustered with the type species of the genus , with DSM 7299 as its nearest neighbour. The genomic average nucleotide identity (orthoANI) values between strain KX21116 and DSM 7299 were 92.74%, while the DNA-DNA hybridization (GGDC) values of the two strains were 48.8%. The predominant fatty acids are C, C c/C1 c and C c/C1 c. Based on a comparative analysis of phylogenetic, phylogenomic, phenotypic and chemotaxonomic characteristics, strain KX21116 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is KX21116 (=MCCC 1K08505=KCTC 92900=JCM 35939).
从中国南海冷泉区采集的贻贝中分离出一株新型革兰氏阴性、氧化酶和过氧化氢酶阳性的杆状细菌,命名为KX21116菌株。KX21116菌株在28°C、pH 6.0、3%(w/v)NaCl条件下,好氧和微需氧条件下生长最佳。其基因组大小为3.16 Mb,G+C含量为28.4 mol%。16S rRNA序列显示,KX21116菌株与DSM 7299(基因序列相似性为98.77%)和AR-13(95.58%)密切相关。系统发育和系统基因组分析表明,KX21116菌株与该属的模式种聚类,DSM 7299为其最接近的邻居。KX21116菌株与DSM 7299之间的基因组平均核苷酸同一性(orthoANI)值为92.74%,而两菌株的DNA-DNA杂交(GGDC)值为48.8%。主要脂肪酸为C、C c/C1 c和C c/C1 c。基于系统发育、系统基因组、表型和化学分类特征的比较分析,KX21116菌株代表该属的一个新物种,为此提出新种名 sp. nov.。模式菌株为KX21116(=MCCC 1K08505=KCTC 92900=JCM 35939)。