Suppr超能文献

利用101组合机器学习框架和多组学数据评估子宫内膜癌中焦亡相关基因

Evaluation of pyroptosis-associated genes in endometrial cancer utilizing a 101-combination machine learning framework and multi-omics data.

作者信息

Huang Li Juan, Liu Chen, Chen Lin, Tang Min, Zhan Shi Tong, Chen Feng, Teng An Yi, Zhou Li Na, Sang Wei Lin, Yang Ye

机构信息

Department of Obstetrics and Gynecology, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

Obstetrics and Gynecology Hospital of Fudan University (Shanghai Red House Ob and Gyn Hospital), Shanghai, China.

出版信息

Front Med (Lausanne). 2025 Jun 5;12:1590405. doi: 10.3389/fmed.2025.1590405. eCollection 2025.

Abstract

BACKGROUND

Endometrial cancer (EC) is a common and increasingly prevalent gynecological malignancy. Pyroptosis, a pro-inflammatory form of programmed cell death, plays dual roles in cancer but remains poorly understood in the context of EC and its immune microenvironment.

METHODS

We identified pyroptosis-associated genes (PAGs) and applied a 101-combination machine learning framework to construct and validate a robust prognostic model using TCGA bulk RNA-seq and single-cell transcriptomic data. Immune infiltration was assessed using CIBERSORT and Tumor Immune Dysfunction and Exclusion (TIDE), while CellChat was employed to investigate pyroptosis-related cell-cell communication. Drug sensitivity was predicted with OncoPredict.

RESULTS

A seven-gene prognostic model demonstrated robust predictive performance with concordance index (-index) values exceeding 0.70 in both training and validation cohorts. The model stratified EC patients into high- and low-risk groups with distinct immune infiltration profiles and differential responses to programmed cell death protein 1 (PD-1) blockade. Drug sensitivity analysis revealed several therapeutic agents with potential efficacy in high-risk and low-risk subgroups.

CONCLUSION

This study highlights the clinical and immunological relevance of pyroptosis in EC and introduces a PAG-based model with strong predictive and therapeutic potential. These findings provide a foundation for developing pyroptosis-guided precision immunotherapy strategies in EC.

摘要

背景

子宫内膜癌(EC)是一种常见且日益普遍的妇科恶性肿瘤。细胞焦亡是程序性细胞死亡的一种促炎形式,在癌症中发挥双重作用,但在EC及其免疫微环境背景下仍了解不足。

方法

我们鉴定了细胞焦亡相关基因(PAG),并应用101组合机器学习框架,使用TCGA批量RNA测序和单细胞转录组数据构建并验证一个强大的预后模型。使用CIBERSORT和肿瘤免疫功能障碍与排除(TIDE)评估免疫浸润,同时使用CellChat研究细胞焦亡相关的细胞间通讯。用OncoPredict预测药物敏感性。

结果

一个七基因预后模型在训练和验证队列中均显示出强大的预测性能,一致性指数(C指数)值超过0.70。该模型将EC患者分为高风险和低风险组,两组具有不同的免疫浸润特征以及对程序性死亡蛋白1(PD-1)阻断的不同反应。药物敏感性分析揭示了几种对高风险和低风险亚组具有潜在疗效的治疗药物。

结论

本研究突出了细胞焦亡在EC中的临床和免疫学相关性,并引入了一个具有强大预测和治疗潜力且基于PAG的模型。这些发现为在EC中开发细胞焦亡指导的精准免疫治疗策略奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a5b/12176823/982ffee25eb9/fmed-12-1590405-g001.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验