在表达GFP-ATG8自噬体标记的拟南芥幼苗中,非生物胁迫下的自噬分析

Analysis of Autophagy Under Abiotic Stress in Arabidopsis Seedlings Expressing the GFP-ATG8 Autophagosome Marker.

作者信息

Agbemafle William, Jayasinghe Vishadinie, Bassham Diane C

机构信息

Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, Iowa.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.

出版信息

Curr Protoc. 2025 Jun;5(6):e70166. doi: 10.1002/cpz1.70166.

Abstract

Plant autophagy is a catabolic process where cellular components such as protein aggregates and dysfunctional organelles are degraded and recycled to maintain homeostasis and facilitate stress resilience. Autophagy relies on a double-membrane vesicle called the autophagosome, which delivers cellular cargo to the vacuole for degradation. The Arabidopsis GFP-ATG8 reporter line is a valuable tool widely used to visualize and quantify autophagosomes via microscopy and monitor autophagic degradation via immunoblotting. Consistent assessment of autophagic activity requires standardized protocols for sample preparation, imaging, and data analysis. Here, we present protocols for monitoring autophagy in Arabidopsis seedlings expressing GFP-ATG8, including treatments to induce or inhibit autophagic flux, as well as imaging and image analysis procedures. These methods enable reliable evaluation of autophagic activity and can be adapted for diverse experimental conditions and genotypes. © 2025 The Author(s). Current Protocols published by Wiley Periodicals LLC. Basic Protocol 1: Growth of Arabidopsis seedlings Basic Protocol 2: Activation of autophagy in Arabidopsis seedlings by abiotic stresses Basic Protocol 3: Inhibition of vacuolar degradation by concanamycin A treatment Basic Protocol 4: Quantification of GFP-ATG8-labeled autophagosomes in Arabidopsis seedlings via microscopy Basic Protocol 5: Analysis of autophagic degradation of GFP-ATG8 via immunoblotting.

摘要

植物自噬是一个分解代谢过程,其中蛋白质聚集体和功能失调的细胞器等细胞成分被降解和再循环,以维持体内平衡并促进胁迫恢复力。自噬依赖于一种称为自噬体的双膜囊泡,它将细胞内物质输送到液泡进行降解。拟南芥绿色荧光蛋白标记的自噬相关蛋白8(GFP-ATG8)报告株系是一种有价值的工具,广泛用于通过显微镜观察和定量自噬体,并通过免疫印迹监测自噬降解。对自噬活性进行一致的评估需要标准化的样品制备、成像和数据分析方案。在这里,我们介绍了监测表达GFP-ATG8的拟南芥幼苗自噬的方案,包括诱导或抑制自噬通量的处理,以及成像和图像分析程序。这些方法能够可靠地评估自噬活性,并可适用于不同的实验条件和基因型。© 2025作者。由威利期刊有限责任公司出版的《当前实验方案》。基本方案1:拟南芥幼苗的生长 基本方案2:非生物胁迫激活拟南芥幼苗的自噬 基本方案3:用 concanamycin A处理抑制液泡降解 基本方案4:通过显微镜定量拟南芥幼苗中GFP-ATG8标记的自噬体 基本方案5:通过免疫印迹分析GFP-ATG8的自噬降解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e81/12188511/f12bfacea7a3/CPZ1-5-0-g001.jpg

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