Suppr超能文献

基于病毒蛋白保守片段的计算机辅助设计多表位疫苗,用于对猪繁殖与呼吸综合征病毒的广谱保护

In Silico Designed Multi-Epitope Vaccine Based on the Conserved Fragments in Viral Proteins for Broad-Spectrum Protection Against Porcine Reproductive and Respiratory Syndrome Virus.

作者信息

Ullah Shaukat, Ullah Hikmat, Fatima Kainat, Lei Tan

机构信息

Key Laboratory of Quantitative Synthetic Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.

University of Chinese Academy of Sciences, Beijing 100049, China.

出版信息

Vet Sci. 2025 Jun 12;12(6):577. doi: 10.3390/vetsci12060577.

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) is a major viral threat to swine, causing significant economic loss in the global pig farming industry. This virus includes two major genotypes, PRRSV1 and PRRSV2, both characterized by high mutation rates and genetic variability, complicating the development of a universally effective vaccine and disease control. To address this challenge, this study utilizes immunoinformatics tools to identify conserved epitopes and design a multi-epitope vaccine candidate against PRRSV based on reverse vaccinology. The complete sequences of PRRSV-encoded proteins were retrieved worldwide, and the conserved fragments were identified through the alignment of polypeptide sequences. Subsequent screening was conducted to screen epitopes for their potential to be safe and to activate B cells, HTLs (helper T cells), and CTLs (cytotoxic T cells). By conjugating the selected epitopes with distinct adjuvant proteins, three vaccine candidates were designed and termed PRRSV-vaccine (PRRSV-V-1, PRRSV-V-2, and PRRSV-V-3, respectively). Furthermore, systematic evaluations of their physicochemical properties, structural stability, binding with pattern recognition receptors, and induction of the host immune system were performed. PRRSV-V-2 had the most promising physicochemical and structural characteristics, strong binding with toll-like receptors (TLR3 and TLR8), and the most vigorous reactions to host immune responses. As the most promising candidate, the recombinant PRRSV plasmid was in silico designed for expression in . Our study proposed a novel approach to PRRSV vaccine development against PRRSV, offering a promising strategy for controlling the infection across diverse PRRSV strains in swine. Despite providing significant insights into vaccine design through computational methods, the results of this study remain predictive. So, it is open for the experimental validations of the scientific community to ensure its actual immunological properties, especially the safety and efficacy.

摘要

猪繁殖与呼吸综合征病毒(PRRSV)是猪面临的主要病毒威胁,给全球养猪业造成重大经济损失。该病毒包括两种主要基因型,即PRRSV1和PRRSV2,二者均具有高突变率和遗传变异性,这使得开发一种普遍有效的疫苗和疾病控制措施变得复杂。为应对这一挑战,本研究利用免疫信息学工具来鉴定保守表位,并基于反向疫苗学设计一种针对PRRSV的多表位候选疫苗。在全球范围内检索PRRSV编码蛋白的完整序列,并通过多肽序列比对鉴定保守片段。随后进行筛选,以筛选具有安全性潜力并能激活B细胞、辅助性T细胞(HTLs)和细胞毒性T细胞(CTLs)的表位。通过将选定的表位与不同的佐剂蛋白偶联,设计了三种候选疫苗,分别命名为PRRSV疫苗(PRRSV-V-1、PRRSV-V-2和PRRSV-V-3)。此外,还对它们的物理化学性质、结构稳定性、与模式识别受体的结合以及对宿主免疫系统的诱导进行了系统评估。PRRSV-V-2具有最有前景的物理化学和结构特征,与Toll样受体(TLR3和TLR8)有强烈结合,并且对宿主免疫反应的反应最为强烈。作为最有前景的候选疫苗,重组PRRSV质粒经计算机模拟设计用于在……中表达。我们的研究提出了一种针对PRRSV疫苗开发的新方法,为控制猪群中不同PRRSV毒株的感染提供了一种有前景的策略。尽管通过计算方法为疫苗设计提供了重要见解,但本研究结果仍具有预测性。因此,有待科学界进行实验验证,以确保其实际免疫特性,特别是安全性和有效性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6676/12197703/53b19f90f6cb/vetsci-12-00577-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验