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横向联邦学习与Cox模型评估

Horizontal federated learning and assessment of Cox models.

作者信息

Westers Frank, Leder Sam, Tealdi Lucia

机构信息

Applied Cryptography & Quantum Applications, Netherlands Institute for Applied Scientific Research (TNO), The Hague, Netherlands.

Data Science, Netherlands Institute for Applied Scientific Research (TNO), The Hague, Netherlands.

出版信息

Front Digit Health. 2025 Jun 12;7:1603630. doi: 10.3389/fdgth.2025.1603630. eCollection 2025.

DOI:10.3389/fdgth.2025.1603630
PMID:40575384
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12198214/
Abstract

The Cox Proportional Hazards model is a widely used method for survival analysis in medical research. However, training an accurate model requires access to a sufficiently large dataset, which is often challenging due to data fragmentation. A potential solution is to combine data from multiple medical institutions, but privacy constraints typically prevent direct data sharing. Federated learning offers a privacy-preserving alternative by allowing multiple parties to collaboratively train a model without exchanging raw data. In this work, we develop algorithms for training Cox models in a federated setting, leveraging survival stacking to facilitate distributed learning. In addition, we introduce a novel secure computation of Schoenfeld residuals, a key diagnostic tool for validating the Cox model. We provide an open-source implementation of our approach and present empirical results that demonstrate the accuracy and benefits of federated Cox regression.

摘要

Cox比例风险模型是医学研究中广泛用于生存分析的方法。然而,训练一个准确的模型需要访问足够大的数据集,由于数据碎片化,这通常具有挑战性。一个潜在的解决方案是合并来自多个医疗机构的数据,但隐私限制通常会阻止直接的数据共享。联邦学习提供了一种隐私保护的替代方案,它允许多方在不交换原始数据的情况下协作训练模型。在这项工作中,我们开发了在联邦环境中训练Cox模型的算法,利用生存堆叠来促进分布式学习。此外,我们引入了一种用于Schoenfeld残差的新型安全计算方法,Schoenfeld残差是验证Cox模型的关键诊断工具。我们提供了我们方法的开源实现,并展示了实证结果,这些结果证明了联邦Cox回归的准确性和优势。

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Horizontal federated learning and assessment of Cox models.横向联邦学习与Cox模型评估
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2
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本文引用的文献

1
Privacy-Enhancing Technologies in Biomedical Data Science.生物医学数据科学中的隐私增强技术。
Annu Rev Biomed Data Sci. 2024 Aug;7(1):317-343. doi: 10.1146/annurev-biodatasci-120423-120107.
2
DC-COX: Data collaboration Cox proportional hazards model for privacy-preserving survival analysis on multiple parties.DC-COX:用于多方隐私保护生存分析的数据协作Cox比例风险模型。
J Biomed Inform. 2023 Jan;137:104264. doi: 10.1016/j.jbi.2022.104264. Epub 2022 Nov 30.
3
Accurate training of the Cox proportional hazards model on vertically-partitioned data while preserving privacy.
在保护隐私的同时,对垂直分区数据进行 Cox 比例风险模型的精确训练。
BMC Med Inform Decis Mak. 2022 Feb 24;22(1):49. doi: 10.1186/s12911-022-01771-3.
4
The c-index is not proper for the evaluation of $t$-year predicted risks.C 指数不适合评估 $t$ 年预测风险。
Biostatistics. 2019 Apr 1;20(2):347-357. doi: 10.1093/biostatistics/kxy006.
5
WebDISCO: a web service for distributed cox model learning without patient-level data sharing.WebDISCO:一种用于分布式Cox模型学习且无需患者级数据共享的网络服务。
J Am Med Inform Assoc. 2015 Nov;22(6):1212-9. doi: 10.1093/jamia/ocv083. Epub 2015 Jul 9.