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鱼类皮肤和鳃微生物群的生态学与可塑性:探寻健康与疾病中的关键因素

The ecology and plasticity of fish skin and gill microbiomes: seeking what matters in health and disease.

作者信息

McMurtrie Jamie, Bell Ashley G, Cable Joanne, Temperton Ben, Tyler Charles R

机构信息

Biosciences, Faculty of Health and Life Sciences, University of Exeter, Exeter, Devon EX4 4QD, United Kingdom.

Sustainable Aquaculture Futures, University of Exeter, Exeter, Devon EX4 4QD, United Kingdom.

出版信息

FEMS Microbiol Rev. 2025 Jan 14;49. doi: 10.1093/femsre/fuaf027.

DOI:10.1093/femsre/fuaf027
PMID:40577810
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12218203/
Abstract

The microbiomes of skin and gill mucosal surfaces are critical components in fish health and homeostasis by competitively excluding pathogens, secreting beneficial compounds, and priming the immune system. Disruption of these microbiomes can compromise their capacity for disease resilience and maintaining host homeostasis. However, the extent and nature of microbiome disruption required to impact fish health negatively remains poorly understood. This review examines how various stressors influence the community composition and functionality of fish skin and gill microbiomes, and the subsequent effects on fish health. Our findings highlight that the impact of stressors on skin and gill microbiomes may differ for different body sites and are highly context-dependent, influenced by a complex interplay of host-specific factors, stressor characteristics, and environmental conditions. By evaluating current knowledge on the genesis and homeostasis of these microbiomes, we highlight a strong influence of environmental factors especially on skin and gill microbiomes compared with fish gut microbiomes, which appear to be more closely regulated by the host's homeostatic and immunological systems. This review emphasizes the importance of understanding the ecology and plasticity of fish skin and gill microbiomes to identify critical thresholds for microbiome shifts that impact fish health and disease resilience.

摘要

皮肤和鳃黏膜表面的微生物群是鱼类健康和体内平衡的关键组成部分,它们通过竞争性排除病原体、分泌有益化合物以及启动免疫系统来发挥作用。这些微生物群的破坏会损害它们抵御疾病的能力以及维持宿主体内平衡的能力。然而,对鱼类健康产生负面影响所需的微生物群破坏程度和性质仍知之甚少。本综述探讨了各种应激源如何影响鱼类皮肤和鳃微生物群的群落组成和功能,以及随后对鱼类健康的影响。我们的研究结果表明,应激源对皮肤和鳃微生物群的影响可能因身体部位不同而有所差异,并且高度依赖于具体情境,受到宿主特异性因素、应激源特征和环境条件的复杂相互作用的影响。通过评估关于这些微生物群的起源和体内平衡的现有知识,我们强调环境因素对皮肤和鳃微生物群的影响尤其显著,与鱼类肠道微生物群相比,后者似乎受到宿主的体内平衡和免疫系统更严格的调控。本综述强调了了解鱼类皮肤和鳃微生物群的生态学和可塑性对于确定影响鱼类健康和疾病恢复力的微生物群变化关键阈值的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/0143ac936077/fuaf027fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/4fceb117825b/fuaf027fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/323d5181107b/fuaf027fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/0143ac936077/fuaf027fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/4fceb117825b/fuaf027fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/323d5181107b/fuaf027fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca9d/12218203/0143ac936077/fuaf027fig3.jpg

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本文引用的文献

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Influence of host phylogeny and water physicochemistry on microbial assemblages of the fish skin microbiome.
宿主进化史和水理化性质对鱼类皮肤微生物组微生物群落的影响。
FEMS Microbiol Ecol. 2024 Feb 14;100(3). doi: 10.1093/femsec/fiae021.
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Influence of short and long term processes on SAR11 communities in open ocean and coastal systems.短期和长期过程对开阔海洋及沿海系统中SAR11群落的影响。
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Single-cell analysis and spatial resolution of the gut microbiome.单细胞分析和肠道微生物组的空间分辨率。
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