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咪唑吩噻嗪杂化物的量子化学建模、分子对接及药物代谢动力学/药物毒性评价

Quantum chemical modeling, molecular docking, and ADMET evaluation of imidazole phenothiazine hybrids.

作者信息

Shukla Deepanjali, Azad Iqbal, Sheikh Sabahat Yasmeen, Ali Saud Nusrat, Ahmad Naseem, Kamal Azhar, Faiyyaz Mohd, Khan Abdul Rahman, Ahmad Varish, Alghamdi Anwar A, Nasibullah Malik, Hassan Firoj

机构信息

Department of Chemistry, Integral University, Dasauli, P.O. Bas-ha, Kursi Road, Lucknow, UP, 226026, India.

Department of Bioengineering, Integral University, Dasauli, P.O. Bas-ha, Kursi Road, Lucknow, 226026, UP, India.

出版信息

Sci Rep. 2025 Jul 2;15(1):23413. doi: 10.1038/s41598-025-90495-1.

Abstract

Cancer is one of the biggest challenges for health concerns in the world. There are so many drugs available, but they have a lack of specificity, poor safety, side effects, and the development of resistance. Therefore, there is an urgent need for much safer and more targeted anticancer treatments. Nitrogen-containing heterocycles play an important role in the development of drugs. Recently, imidazole and phenothiazine rings are well known for their antiproliferative and anticancer activities. This study employs the molecular hybridisation method to link these bioactive scaffolds and develop novel N-substituted imidazole-phenothiazine (N-IPTZ) hybrids. All the synthesised hybrids were characterised by using analytical techniques such as H-NMR,C-NMR, mass spectrum, and FT-IR. Furthermore, the DFT analysis under the B3LYP/6-311G(d, p) level in gas phase to optimise and correlate the structures of the synthesised hybrids was also performed. The optimised structure was used to determine the energies of frontier molecular orbitals (HOMO-LUMO), quantum chemical descriptors (QCD), and molecular electrostatic potentials (MEP). Additionally, in silico approaches such as ADMET, BOILED-Egg, and bioactivity radar were also performed to evaluate the oral bioavailability of the synthesised hybrids. Molecular docking and MD simulation studies were also conducted to assess the interaction profile of the synthesised hybrids with cancer target receptors like EGFR, IGF, VEGFR1, VEGFR2, and PARP-2. It was found through docking studies that the synthesised N-IPTZ(a-c) hybrids might interact with amino acids such as GLY695, SER696, GLY697, ALA698, PHE699, LYS721, GLY772, CYS773, THR766, GLN767, LEU768, MET769, ARG817, ASN818, and THR830. Additionally, it reveals hydrogen bonding with ASP831, with binding energies of - 7.23, - 6.11, and - 5.93 kcal/mol. Moreover, all the synthesised hybrids were also analysed for their anti-cancer activity against the human liver cancer cell line (HepG2) by MTT assay. Obtained results revealed that N-IPTZ(c) exhibited anticancer activity with an IC value of 35.3 µg/mL.

摘要

癌症是全球健康问题面临的最大挑战之一。市面上有很多药物,但它们缺乏特异性、安全性差、有副作用且会产生耐药性。因此,迫切需要更安全、更具针对性的抗癌治疗方法。含氮杂环在药物研发中发挥着重要作用。最近,咪唑环和吩噻嗪环因其抗增殖和抗癌活性而闻名。本研究采用分子杂交方法连接这些生物活性支架,开发新型N-取代咪唑-吩噻嗪(N-IPTZ)杂化物。所有合成的杂化物均通过1H-NMR、13C-NMR、质谱和傅里叶变换红外光谱等分析技术进行表征。此外,还在气相中B3LYP/6-311G(d, p)水平下进行密度泛函理论(DFT)分析,以优化并关联合成杂化物的结构。优化后的结构用于确定前线分子轨道(HOMO-LUMO)的能量、量子化学描述符(QCD)和分子静电势(MEP)。此外,还采用了如ADMET、水煮蛋模型和生物活性雷达等计算机模拟方法来评估合成杂化物的口服生物利用度。还进行了分子对接和分子动力学模拟研究,以评估合成杂化物与表皮生长因子受体(EGFR)、胰岛素样生长因子(IGF)、血管内皮生长因子受体1(VEGFR1)、血管内皮生长因子受体2(VEGFR2)和聚(ADP-核糖)聚合酶-2(PARP-2)等癌症靶标受体的相互作用情况。通过对接研究发现,合成的N-IPTZ(a-c)杂化物可能与甘氨酸695、丝氨酸696、甘氨酸697、丙氨酸698、苯丙氨酸699、赖氨酸721、甘氨酸772、半胱氨酸773、苏氨酸766、谷氨酰胺柒67、亮氨酸768、蛋氨酸769、精氨酸817、天冬酰胺818和苏氨酸830等同种氨基酸相互作用。此外,它还与天冬氨酸831形成氢键,结合能分别为-7.23千卡/摩尔、-6.11千卡/摩尔和-5.93千卡/摩尔。此外,还通过MTT法分析了所有合成杂化物对人肝癌细胞系(HepG2)的抗癌活性。所得结果表明,N-IPTZ(c)表现出抗癌活性,IC50值为35.3微克/毫升。

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