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由生物伯特驱动的协同作用:对前列腺癌骨转移的高级文献计量学和分子见解。

BioBERT-powered synergy: advanced bibliometric and molecular insights into prostate cancer bone metastasis.

作者信息

Liu Zile, Chen Zexin, Xue Kangyi, Chen Mingkun

机构信息

Department of Urology, The Fourth Affiliated Hospital of Guangzhou Medical University, Guangzhou Medical University, Guangzhou, Guangdong, China.

The First Affiliated Medical College, Southern Medical University, Guangzhou, Guangdong, China.

出版信息

Front Immunol. 2025 Jun 18;16:1562559. doi: 10.3389/fimmu.2025.1562559. eCollection 2025.

Abstract

BACKGROUND

Prostate cancer (PC) is a leading cause of male cancer mortality, with bone metastasis (BM) being a frequent and debilitating complication. Despite therapeutic advancements, the molecular mechanisms underlying BM remain poorly understood. This study aims to bridge this gap by integrating bibliometric analysis with bioinformatics to provide a comprehensive overview of the academic trends and molecular profiles associated with prostate cancer bone metastasis (PCBM).

METHODS

We conducted a bibliometric analysis to identify key contributors in PCBM research from 2004 to 2024 with advanced tools like BioBERT to mine gene and disease entities from the abstracts of relevant articles. Gene expression data from GSE32269 was analyzed to identify differentially expressed genes (DEGs), followed by enrichment analyses for biological functions and pathways.

RESULTS

The bibliometric review showed an increasing trend in research output, focusing on therapeutic strategies and biomarkers. Bioinformatics analysis revealed various DEGs, significantly enriched in immune response and cell adhesion pathways. Semantic relationship analysis highlighted potential shared pathways between genes and diseases, offering clues for novel immunotherapy targets.

CONCLUSION

By integrating bibliometric analysis with bioinformatics, this study provides new insights into PCBM. Specifically, our findings emphasize the impact of reprogramming on immune cells and its role in reshaping the tumor microenvironment to support cancer cells' evasion of immune surveillance and promotion of metastasis. These results suggest that targeting immune checkpoints and innovative combination therapies may be critical directions for improving outcomes in prostate cancer patients.

摘要

背景

前列腺癌(PC)是男性癌症死亡的主要原因,骨转移(BM)是一种常见且使人衰弱的并发症。尽管治疗取得了进展,但BM背后的分子机制仍知之甚少。本研究旨在通过将文献计量分析与生物信息学相结合,全面概述与前列腺癌骨转移(PCBM)相关的学术趋势和分子特征。

方法

我们进行了文献计量分析,以识别2004年至2024年PCBM研究中的关键贡献者,并使用BioBERT等先进工具从相关文章的摘要中挖掘基因和疾病实体。分析来自GSE32269的基因表达数据,以识别差异表达基因(DEG),随后对生物学功能和途径进行富集分析。

结果

文献计量综述显示研究产出呈上升趋势,重点是治疗策略和生物标志物。生物信息学分析揭示了各种DEG,显著富集于免疫反应和细胞粘附途径。语义关系分析突出了基因与疾病之间潜在的共享途径,为新型免疫治疗靶点提供了线索。

结论

通过将文献计量分析与生物信息学相结合,本研究为PCBM提供了新的见解。具体而言,我们的研究结果强调了重编程对免疫细胞的影响及其在重塑肿瘤微环境以支持癌细胞逃避免疫监视和促进转移中的作用。这些结果表明,靶向免疫检查点和创新联合疗法可能是改善前列腺癌患者预后的关键方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd8c/12213787/a383fd6d78b7/fimmu-16-1562559-g001.jpg

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