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研究卤代喹啉衍生物对单胺氧化酶-A和单胺氧化酶-B的抑制潜力:合成、晶体结构、密度泛函理论及分子动力学模拟

Investigating the Inhibitory Potential of Halogenated Quinoline Derivatives against MAO‑A and MAO-B: Synthesis, Crystal Structure, Density Functional Theory, and Molecular Dynamics Simulations.

作者信息

Oladipo Segun D, Luckay Robert C, Olalekan Samuel O, Badeji Abosede A, Matinise Nonkosi, Tshikhudo Fulufhelo

机构信息

Department of Chemistry and Polymer Science, Stellenbosch University, Private Bag X1, Matieland 7602, South Africa.

Department of Chemical Sciences, Olabisi Onabanjo University, P.M.B, Ago-Iwoye 2002, Nigeria.

出版信息

ACS Omega. 2025 Jun 13;10(25):26500-26519. doi: 10.1021/acsomega.4c11530. eCollection 2025 Jul 1.

DOI:10.1021/acsomega.4c11530
PMID:40620945
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12223827/
Abstract

Two halogenated quinoline derivatives, namely, -(4-fluorophenyl)-1-(quinoline-2-yl)-methanimine () and -(3-chloro-4-fluorophenyl)-1-(quinoline-2-yl)-methanimine () were synthesized and elucidated by spectroscopic techniques. The molecular structures of and revealed that the azomethine functional group in both compounds is coplanar to the quinoline ring as well as the phenyl ring, as is evident by N2-C8-C7-N1 and C7-N1-C4-C3 torsion angles. In the crystal packing of both compounds, there exists intermolecular CH···N hydrogen bonding. In silico approaches were explored to probe the inhibitory potential of the two compounds against MAO-A and MAO-B, proteins that have been implicated in Parkinson's and neurodegenerative diseases. Docking studies revealed that and exhibit superior binding affinities compared to reference drugs, with demonstrating a binding score of -7.24 kcal/mol for MAO-A and -8.37 kcal/mol for MAO-B, outperforming harmine (-6.57 kcal/mol) and rasagiline (-6.47 kcal/mol). Thermodynamic analysis further confirmed the stability of and interactions, with Δ values of -38.24 and -35.80 kcal/mol for MAO-A, respectively, surpassing that of harmine (-27.82 kcal/mol). Similarly, for MAO-B, and achieved Δ bind values of -35.02 and -33.49 kcal/mol, respectively, exceeding rasagiline (-32.95 kcal/mol). Post-MD simulations analysis revealed that the complexes of / with MAO-A and MAO-B displayed stronger structural stability than reference drugs, as depicted by their lower RMSF, RMSD, and RoG values. For MAO-A, harmine (reference drug) had an RMSD of 3.508 ± 1.328 Å, RoG of 24.916 ± 0.364 Å, and RMSF of 5.990 ± 2.984 Å, whereas , which outshined both reference drug and , had an RMSD of 2.683 ± 0.625 Å, RoG of 24.890 ± 0.198 Å, and RMSF of 6.307 ± 2.580 Å. Quantum chemical calculations and charge distribution parameters were done in gaseous and aqueous phases using different basis sets. Compound was observed to be more chemically reactive and less stable due to its lower energy band gap (Δ) relative to that of . The influence of solvation was quantified, showing that aqueous environment enhances molecular stability and reduces reactivity.

摘要

合成了两种卤代喹啉衍生物,即α-(4-氟苯基)-1-(喹啉-2-基)甲亚胺( )和α-(3-氯-4-氟苯基)-1-(喹啉-2-基)甲亚胺( ),并通过光谱技术对其进行了表征。 和 的分子结构表明,两种化合物中的偶氮甲碱官能团与喹啉环以及苯环共面,这从N2-C8-C7-N1和C7-N1-C4-C3扭转角可以明显看出。在两种化合物的晶体堆积中,存在分子间CH···N氢键。采用计算机模拟方法探究了这两种化合物对单胺氧化酶A(MAO-A)和单胺氧化酶B(MAO-B)的抑制潜力,这两种蛋白质与帕金森病和神经退行性疾病有关。对接研究表明,与参考药物相比, 和 表现出更高的结合亲和力, 对MAO-A的结合分数为-7.24 kcal/mol,对MAO-B的结合分数为-8.37 kcal/mol,优于 harmine(-6.57 kcal/mol)和雷沙吉兰(-6.47 kcal/mol)。热力学分析进一步证实了 和 相互作用的稳定性,MAO-A的Δ 值分别为-38.24和-35.80 kcal/mol,超过了harmine(-27.82 kcal/mol)。同样,对于MAO-B, 和 的Δ bind值分别为-35.02和-33.49 kcal/mol,超过了雷沙吉兰(-32.95 kcal/mol)。分子动力学模拟后的分析表明, / 与MAO-A和MAO-B的复合物比参考药物表现出更强的结构稳定性,这从它们较低的均方根波动(RMSF)、均方根偏差(RMSD)和回转半径(RoG)值可以看出。对于MAO-A,harmine(参考药物)的RMSD为3.508±1.328 Å,RoG为24.916±0.364 Å,RMSF为5.990±2.984 Å,而 优于参考药物和 ,其RMSD为2.683±0.625 Å,RoG为24.890±0.198 Å,RMSF为6.307±2.580 Å。使用不同基组在气相和水相中进行了量子化学计算和电荷分布参数计算。由于化合物 的能带隙(Δ)相对于 较低,观察到其化学反应性更强且稳定性更低。溶剂化的影响进行了量化,结果表明水环境增强了分子稳定性并降低了反应性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a48d/12223827/121a37c1cdf6/ao4c11530_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a48d/12223827/493413fa5bff/ao4c11530_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a48d/12223827/121a37c1cdf6/ao4c11530_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a48d/12223827/493413fa5bff/ao4c11530_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a48d/12223827/121a37c1cdf6/ao4c11530_0005.jpg

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