• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

氢键中的轨道相互作用:来自化学键重叠模型的视角

Orbital Interactions in Hydrogen Bonds: A Perspective From the Chemical Bond Overlap Model.

作者信息

Santos Rodolfo A, Santos- Carlos V, Aguiar Eduardo C, Carneiro Neto Albano N, Moura Renaldo T

机构信息

Department of Chemistry, Federal University of Paraiba, João Pessoa, Brazil.

Academic Unit of Belo Jardim, Federal Rural University of Pernambuco, Belo Jardim, Brazil.

出版信息

J Comput Chem. 2025 Jul 15;46(19):e70166. doi: 10.1002/jcc.70166.

DOI:10.1002/jcc.70166
PMID:40635478
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12242117/
Abstract

Hydrogen bonds are essential chemical interactions that occur in various systems, playing a critical role in determining molecular structures, dynamics, and reactivity. While quantum chemical methods such as Quantum Theory of Atoms in Molecules (QTAIM) and Natural Bond Orbital (NBO) analyses have traditionally been used to explore these interactions, this work introduces the Chemical Bond Overlap (OP) Model and its topological (TOP) descriptors as a complementary approach for analyzing orbital overlap contributions in hydrogen bonds. The study reports a systematic investigation of a series of hydrogen-bonded systems (a total of 25 systems), demonstrating how electron-donating and electron-withdrawing substituents influence bond characteristics. The results reveal that OP/TOP effectively captures the effects of electronic perturbations, offering insights into the (X) interactions and serving as a complementary approach to QTAIM, NBO, and local vibrational modes theory (LVM). Notably, for nonconventional hydrogen bonds ( ), the OP/TOP model, consistent with LVM, correctly captures the expected increase in interaction strength for . This agrees with the higher electrophilicity of the hydrogen in , as indicated by its lower pKa and weaker CH bond dissociation energy. Additionally, the inclusion of electron-donating groups significantly enhances lone pair antibonding orbital interactions, increasing NBO occupancy and electron density at the hydrogen bond critical point (BCP), as reflected by a decrease in and an increase in . This behavior consistently indicates hydrogen bond strengthening across QTAIM, NBO, and OP/TOP descriptors. Calculations were performed using the B97X-D/def2-TZVP level of theory. The findings establish OP/TOP as a powerful tool for computational chemistry, particularly in the study of weak intermolecular interactions and molecular design.

摘要

氢键是各种体系中存在的重要化学相互作用,在决定分子结构、动力学和反应活性方面起着关键作用。虽然诸如分子中的原子量子理论(QTAIM)和自然键轨道(NBO)分析等量子化学方法传统上用于探索这些相互作用,但本工作引入了化学键重叠(OP)模型及其拓扑(TOP)描述符,作为分析氢键中轨道重叠贡献的一种补充方法。该研究报告了对一系列氢键体系(共25个体系)的系统研究,展示了供电子和吸电子取代基如何影响键的特性。结果表明,OP/TOP有效地捕捉了电子扰动的影响,为(X)相互作用提供了见解,并作为QTAIM、NBO和局部振动模式理论(LVM)的补充方法。值得注意的是,对于非常规氢键(),OP/TOP模型与LVM一致,正确地捕捉到了()相互作用强度预期的增加。这与()中氢的较高亲电性一致,其较低的pKa和较弱的C-H键解离能表明了这一点。此外,引入供电子基团显著增强了孤对反键轨道相互作用,增加了NBO占据率和氢键临界点(BCP)处的电子密度,这表现为()的降低和()的增加。这种行为在QTAIM、NBO和OP/TOP描述符中都一致表明氢键增强。计算使用了B97X-D/def2-TZVP理论水平。这些发现确立了OP/TOP作为计算化学的一种强大工具,特别是在弱分子间相互作用和分子设计的研究中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/2086d07396b0/JCC-46-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/3f59cb5e3ac1/JCC-46-0-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/387747856148/JCC-46-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/ce975650f9fb/JCC-46-0-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/2086d07396b0/JCC-46-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/3f59cb5e3ac1/JCC-46-0-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/387747856148/JCC-46-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/ce975650f9fb/JCC-46-0-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca19/12242117/2086d07396b0/JCC-46-0-g002.jpg

相似文献

1
Orbital Interactions in Hydrogen Bonds: A Perspective From the Chemical Bond Overlap Model.氢键中的轨道相互作用:来自化学键重叠模型的视角
J Comput Chem. 2025 Jul 15;46(19):e70166. doi: 10.1002/jcc.70166.
2
Accreditation through the eyes of nurse managers: an infinite staircase or a phenomenon that evaporates like water.护士长眼中的认证:是无尽的阶梯还是如流水般消逝的现象。
J Health Organ Manag. 2025 Jun 30. doi: 10.1108/JHOM-01-2025-0029.
3
Management of urinary stones by experts in stone disease (ESD 2025).结石病专家对尿路结石的管理(2025年结石病专家共识)
Arch Ital Urol Androl. 2025 Jun 30;97(2):14085. doi: 10.4081/aiua.2025.14085.
4
Short-Term Memory Impairment短期记忆障碍
5
Light-Driven C(sp)-C(sp) Bond Functionalizations Enabled by the PCET Activation of Alcohol O-H Bonds.通过醇O-H键的PCET活化实现光驱动的C(sp)-C(sp)键官能团化
Acc Chem Res. 2025 Jul 1;58(13):2061-2071. doi: 10.1021/acs.accounts.5c00246. Epub 2025 Jun 13.
6
The Black Book of Psychotropic Dosing and Monitoring.《精神药物剂量与监测黑皮书》
Psychopharmacol Bull. 2024 Jul 8;54(3):8-59.
7
Health professionals' experience of teamwork education in acute hospital settings: a systematic review of qualitative literature.医疗专业人员在急症医院环境中团队合作教育的经验:对定性文献的系统综述
JBI Database System Rev Implement Rep. 2016 Apr;14(4):96-137. doi: 10.11124/JBISRIR-2016-1843.
8
Hail Lifestyle Medicine consensus position statement as a medical specialty: Middle Eastern perspective.欢呼将生活方式医学作为一门医学专业的共识立场声明:中东视角。
Front Public Health. 2025 Jun 20;13:1455871. doi: 10.3389/fpubh.2025.1455871. eCollection 2025.
9
Does the Presence of Missing Data Affect the Performance of the SORG Machine-learning Algorithm for Patients With Spinal Metastasis? Development of an Internet Application Algorithm.缺失数据的存在是否会影响 SORG 机器学习算法在脊柱转移瘤患者中的性能?开发一种互联网应用算法。
Clin Orthop Relat Res. 2024 Jan 1;482(1):143-157. doi: 10.1097/CORR.0000000000002706. Epub 2023 Jun 12.
10
Quality improvement strategies for diabetes care: Effects on outcomes for adults living with diabetes.糖尿病护理质量改进策略:对成年糖尿病患者结局的影响。
Cochrane Database Syst Rev. 2023 May 31;5(5):CD014513. doi: 10.1002/14651858.CD014513.

本文引用的文献

1
Chemical Bond Overlap Descriptors From Multiconfiguration Wavefunctions.多组态波函数的化学键重叠描述符
J Comput Chem. 2025 Jan 5;46(1):e27534. doi: 10.1002/jcc.27534.
2
Mapping the Interaction Landscape of Adenosine and Minoxidil Sulfate Using an Independent Gradient Model Based on Hirshfeld Partition and Interaction Region Indicator.基于 Hirshfeld 划分和相互作用区域指标的独立梯度模型绘制腺苷与硫酸米诺地尔的相互作用图谱
J Phys Chem B. 2024 Oct 10;128(40):9847-9858. doi: 10.1021/acs.jpcb.4c05283. Epub 2024 Sep 27.
3
Clusters of solvated ferrous ion in water-ammonia mixture: Structures and noncovalent interactions.
水-氨混合溶剂中被溶剂化的二价铁离子簇:结构和非共价相互作用。
J Mol Graph Model. 2024 Dec;133:108867. doi: 10.1016/j.jmgm.2024.108867. Epub 2024 Sep 18.
4
On the synergetic effects of cyclic cooperativity in water clusters.论水簇中循环协同作用的协同效应。
Phys Chem Chem Phys. 2024 Aug 14;26(32):21332-21336. doi: 10.1039/d4cp02580f.
5
Molecular Hydrogen Acts as a Hydrogen Bond Proton Acceptor: From Protonated Betaine Tagging to the Weakest Hydrogen Bond.分子氢作为氢键质子受体:从质子化甜菜碱标记到最弱氢键
J Phys Chem A. 2024 May 23;128(20):3968-3981. doi: 10.1021/acs.jpca.4c01331. Epub 2024 May 8.
6
Bond analysis in meta- and para-substituted thiophenols: overlap descriptors, local mode analysis, and QTAIM.间位和对位取代硫酚的键分析:重叠描述符、局域模式分析和量子拓扑原子分子理论
J Mol Model. 2024 Apr 19;30(5):139. doi: 10.1007/s00894-024-05932-1.
7
Blue- and Red-Shifting C-H⋯O Hydrogen Bonds of Cyclic Ethers with Haloforms: Effect of Ring-Size and Consistency with Bent's Rule.环醚与卤仿形成的蓝移和红移C-H⋯O氢键:环大小的影响及与本特规则的一致性
Chemphyschem. 2024 Jul 2;25(13):e202400263. doi: 10.1002/cphc.202400263. Epub 2024 May 16.
8
Exploring Jahn-Teller distortions: a local vibrational mode perspective.探索 Jahn-Teller 畸变:局域振动模式视角
J Mol Model. 2024 Mar 13;30(4):102. doi: 10.1007/s00894-024-05882-8.
9
Hydrogen bond energy estimation (H-BEE) in large molecular clusters: A Python program for quantum chemical investigations.大分子簇中的氢键能量估计(H-BEE):用于量子化学研究的Python程序。
J Comput Chem. 2024 Feb 15;45(5):274-283. doi: 10.1002/jcc.27237. Epub 2023 Oct 4.
10
Decoding Chemical Bonds: Assessment of the Basis Set Effect on Overlap Electron Density Descriptors and Topological Properties in Comparison to QTAIM.解码化学键:与量子拓扑原子分子理论(QTAIM)相比,评估基组对重叠电子密度描述符和拓扑性质的影响。
J Phys Chem A. 2023 Sep 28;127(38):7997-8014. doi: 10.1021/acs.jpca.3c04504. Epub 2023 Sep 13.