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间位和对位取代硫酚的键分析:重叠描述符、局域模式分析和量子拓扑原子分子理论

Bond analysis in meta- and para-substituted thiophenols: overlap descriptors, local mode analysis, and QTAIM.

作者信息

Barbosa Willis G, Santos-Jr Carlos V, Andrade Railton B, Lucena Juracy R, Moura Renaldo T

机构信息

Department of Chemistry, State University of Paraiba, Campina Grande, 58429-500, PB, Brazil.

Department of Chemistry, Federal University of Paraiba, João Pessoa, 58051-970, PB, Brazil.

出版信息

J Mol Model. 2024 Apr 19;30(5):139. doi: 10.1007/s00894-024-05932-1.

Abstract

CONTEXT

This study delves into the chemical nuances of thiophenols and their derivatives through a comprehensive computational analysis, moving beyond traditional energetic perspectives such as bond dissociation enthalpy and S-H dissociation dynamics. By employing the overlap model along with its topological descriptors (OP/TOP), quantum theory of atoms in molecules (QTAIM), and local vibrational mode (LVM) theories, the research provides a deeper understanding of the S-H and C-S bonding scenarios in substituted thiophenols. The investigation follows the electron-donating capacity of S-H substituent variation with the nature and positioning of other ring substituents. Energy profile analyses indicate distinct stability differences in the cis and trans conformations of meta- and para-PhSH systems, influenced by the electron-donating strength of these substituents. The study also uncovers significant variations in S-H bond distances and descriptor values, particularly in para-substituted PhSH, reflecting the influence of electron-donating or withdrawing substituents. In contrast, alterations at the meta-position show minimal effects on C-S bond descriptors, while para-substitutions markedly influence C-S bond characteristics, demonstrating a clear correlation with the electron-donating or withdrawing capabilities of the substituents. This research sheds light on the intricate bond dynamics in aromatic systems with diverse substituents, highlighting the complex interaction between electronic effects and molecular conformation.

METHODS

The study employs the B97X-D/Def2TZVP level of theory for molecular geometries, ensuring accurate characterization of structures as true minima via analytical harmonic frequency determination. The electronic properties of S-H and C-S bonds in variously substituted thiophenols were analyzed using OP/TOP, QTAIM, and LVM methodologies. Computational processes, including conformational scans, geometry optimizations, and vibrational frequency calculations, were conducted using Gaussian 09, with ultra-fine integration grids and tight convergence criteria for the SCF procedure. Bond descriptors were computed utilizing ChemBOS, Multiwfn, and LModeA software, providing a robust and detailed examination of bond properties.

摘要

背景

本研究通过全面的计算分析深入探究了苯硫酚及其衍生物的化学细微差别,超越了诸如键解离焓和S-H解离动力学等传统能量观点。通过运用重叠模型及其拓扑描述符(OP/TOP)、分子中原子的量子理论(QTAIM)和局部振动模式(LVM)理论,该研究对取代苯硫酚中的S-H和C-S键合情况有了更深入的理解。该研究追踪了S-H取代基变化的给电子能力与其他环取代基的性质和位置的关系。能量分布分析表明,间位和对位-PhSH体系的顺式和反式构象存在明显的稳定性差异,这受到这些取代基给电子强度的影响。该研究还发现S-H键距离和描述符值存在显著变化,特别是在对位取代的PhSH中,这反映了给电子或吸电子取代基的影响。相比之下,间位的变化对C-S键描述符的影响最小,而对位取代则显著影响C-S键特征,表明与取代基的给电子或吸电子能力存在明显的相关性。本研究揭示了具有不同取代基的芳香体系中复杂的键动力学,突出了电子效应与分子构象之间的复杂相互作用。

方法

该研究采用B97X-D/Def2TZVP理论水平来确定分子几何结构,通过分析谐波频率测定确保将结构准确表征为真正的极小值。使用OP/TOP、QTAIM和LVM方法分析了各种取代苯硫酚中S-H和C-S键的电子性质。使用高斯09进行了包括构象扫描、几何优化和振动频率计算在内的计算过程,采用了超精细积分网格和用于SCF程序的严格收敛标准。利用ChemBOS、Multiwfn和LModeA软件计算键描述符,对键性质进行了全面而详细的研究。

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