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囊性纤维化中生物膜形成的时间分辨双转录组学

Time-resolved dual transcriptomics of biofilm formation in cystic fibrosis.

作者信息

Asensio Núria Crua, Rendón Javier Macho, González López Juan José, Tizzano Sílvia Gartner, Martín Gómez Maria Teresa, Burgas Marc Torrent

机构信息

The Systems Biology of Infection Laboratory, Department of Biochemistry and Molecular Biology, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, 08193, Spain.

Servei de Microbiologia, Hospital Universitari Vall d'Hebron, Barcelona, 08035, Spain.

出版信息

Biofilm. 2025 Jul 2;10:100301. doi: 10.1016/j.bioflm.2025.100301. eCollection 2025 Dec.

DOI:10.1016/j.bioflm.2025.100301
PMID:40697188
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12281032/
Abstract

biofilms cause severe infections in the airways of patients suffering from cystic fibrosis (CF) that are difficult to eradicate, even with intensive antibiotic therapy. The main goal of this study was to define the dual transcriptional response associated with the formation of biofilms in a polarized lung epithelium monolayer. We analyzed the dual response of healthy and CF epithelium after infection with isolates from acute and chronic infections. Our results show that strains of isolated from chronic infections specifically increase the expression of secretion systems of type I, III and VI to hijack the host response. Conversely, strains associated with acute illness use ABC transporters to counteract the antimicrobial response. In return, a distinctive expression pattern in the CF epithelium, including a high degree of cytokine secretion and keratinization, is largely observed in acute infections. Our results show that both host and pathogen genomic backgrounds contribute to the outcome of infection and specific transcriptional signatures could be used in the diagnosis, particularly in CF patients.

摘要

生物膜在患有囊性纤维化(CF)的患者气道中引发严重感染,即便进行强化抗生素治疗也难以根除。本研究的主要目标是确定与极化肺上皮单层中生物膜形成相关的双重转录反应。我们分析了健康上皮和CF上皮在感染急性和慢性感染分离株后的双重反应。我们的结果表明,从慢性感染中分离出的菌株会特异性增加I型、III型和VI型分泌系统的表达,以劫持宿主反应。相反,与急性疾病相关的菌株利用ABC转运蛋白来对抗抗菌反应。作为回报,在急性感染中很大程度上观察到CF上皮中有独特的表达模式,包括高度的细胞因子分泌和角质化。我们的结果表明,宿主和病原体的基因组背景都对感染结果有影响,特定的转录特征可用于诊断,尤其是在CF患者中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/50e04dab2733/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/9b103ae1ba8b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/085650621038/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/99e4e6dc17db/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/50e04dab2733/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/9b103ae1ba8b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/085650621038/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/99e4e6dc17db/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b74b/12281032/50e04dab2733/gr4.jpg

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本文引用的文献

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Pseudomonas aeruginosa faces a fitness trade-off between mucosal colonization and antibiotic tolerance during airway infection.铜绿假单胞菌在气道感染过程中面临着在黏膜定植和抗生素耐药性之间的适应性权衡。
Nat Microbiol. 2024 Dec;9(12):3284-3303. doi: 10.1038/s41564-024-01842-3. Epub 2024 Oct 25.
2
The battle within: how uses host-pathogen interactions to infect the human lung.体内之战:[病原体名称]如何利用宿主与病原体的相互作用感染人类肺部。 (你提供的原文中“how”后面缺少具体内容,这里补充了“[病原体名称]”以便译文更通顺完整,若有准确信息请替换。)
Crit Rev Microbiol. 2024 Oct 9:1-36. doi: 10.1080/1040841X.2024.2407378.
3
Pseudomonas aeruginosa breaches respiratory epithelia through goblet cell invasion in a microtissue model.
铜绿假单胞菌通过微组织模型中的杯状细胞入侵破坏呼吸道上皮细胞。
Nat Microbiol. 2024 Jul;9(7):1725-1737. doi: 10.1038/s41564-024-01718-6. Epub 2024 Jun 10.
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Mutations in the efflux pump regulator MexZ shift tissue colonization by Pseudomonas aeruginosa to a state of antibiotic tolerance.MexZ 外排泵调节剂的突变将铜绿假单胞菌的组织定殖状态转变为抗生素耐受状态。
Nat Commun. 2024 Mar 22;15(1):2584. doi: 10.1038/s41467-024-46938-w.
5
Application of a quantitative framework to improve the accuracy of a bacterial infection model.应用定量框架提高细菌感染模型的准确性。
Proc Natl Acad Sci U S A. 2023 May 9;120(19):e2221542120. doi: 10.1073/pnas.2221542120. Epub 2023 May 1.
6
Loss of CFTR function is associated with reduced bitter taste receptor-stimulated nitric oxide innate immune responses in nasal epithelial cells and macrophages.CFTR 功能丧失与鼻上皮细胞和巨噬细胞中苦味受体刺激的一氧化氮先天免疫反应减少有关。
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7
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Microbiol Spectr. 2022 Dec 21;10(6):e0240822. doi: 10.1128/spectrum.02408-22. Epub 2022 Oct 27.
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