• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

整合多组学分析确定PDZ结合激酶(PBK)为肝细胞癌的一种新型预后生物标志物。

Integrated Multi-Omics Profiling Identifies PDZ-Binding Kinase (PBK) as a Novel Prognostic Biomarker in Hepatocellular Carcinoma.

作者信息

Zhang Juan, Xu Yingyu, Ni Xiaojian, Mao Zhiyi, Xiao Haitao, Chen Maopei, Lin Youpei, Pan Jiaomeng, Zhang Boheng, Zhang Lan, Zheng Xueying, Song Guohe, Ge Ningling

机构信息

Department of Hepatobiliary Oncology, Liver Cancer Institute, Zhongshan Hospital; Key Laboratory of Carcinogenesis and Cancer Invasion (Ministry of Education), Fudan University, Shanghai, People's Republic of China.

Department of Biliary Surgery, Zhongshan Hospital, Fudan University; Biliary Tract Disease Center of Zhongshan Hospital, Fudan University; Biliary Tract Disease Institute, Fudan University; Cancer Center, Zhongshan Hospital, Fudan University; Shanghai Biliary Tract Minimal Invasive Surgery and Materials Engineering Research Center, Shanghai, People's Republic of China.

出版信息

J Hepatocell Carcinoma. 2025 Jul 17;12:1453-1469. doi: 10.2147/JHC.S493907. eCollection 2025.

DOI:10.2147/JHC.S493907
PMID:40697330
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12279550/
Abstract

BACKGROUND

Hepatocellular carcinoma (HCC) necessitates novel immunotherapeutic targets. PBK, a cancer/testis antigen (CTA), was identified as a pivotal hub gene influencing prognosis, tumor mutation burden (TMB), and immune microenvironment remodeling.

METHODS

PBK was prioritized using weighted gene co-expression network analysis (WGCNA) and differential expression screening in the TCGA-LIHC cohort, intersected with curated CTAs. Analyses assessed correlations with clinicopathological features (TNM stage, survival), genomic characterization (mutation frequencies), and functional validation via siRNA-mediated PBK knockdown in Huh7 cells (migration assay). Single-cell RNA sequencing (scRNA-seq) profiled of the tumor immune microenvironment.

RESULTS

PBK overexpression was significantly correlated with advanced TNM stage ( < 0.05) and poor survival (log-rank = 0.003). Genomic analysis revealed distinct mutation profiles: high-PBK tumors exhibited increased mutation frequency (39% vs 17%) but decreased mutations (20% vs 31%). Patients exhibiting with combined PBK overexpression and high TMB demonstrated the poorest prognosis. Functional validation confirmed that PBK knockdown significantly inhibited Huh7 cell migration capacity ( < 0.05). scRNA-seq analysis showed PBK-enriched tumors contained elevated proportions of immunosuppressive SPP1(+) macrophages (22.33% vs 6.6%, FDR corrected < 0.001) and CD8(+) SLC4A10(+) MAIT cells (9.82% vs 4.7%, FDR corrected < 0.001).

CONCLUSION

PBK synergistically drives HCC progression through three synergistic mechanisms: (1) promoting oncogenic mutation accumulation (eg, ), (2) increasing metastatic potential, and (3) reprogramming an immune-suppressive microenvironment enriched for SPP1(+) macrophages and CD8(+)SLC4A10(+) MAIT cells. This establishes PBK as a dual-purpose biomarker for prognostic stratification and immunotherapy resistance prediction, providing a mechanistic rationale for developing PBK-targeted therapies in HCC.

摘要

背景

肝细胞癌(HCC)需要新的免疫治疗靶点。PBK是一种癌胚抗原(CTA),被确定为影响预后、肿瘤突变负荷(TMB)和免疫微环境重塑的关键枢纽基因。

方法

在TCGA-LIHC队列中,使用加权基因共表达网络分析(WGCNA)和差异表达筛选对PBK进行优先级排序,并与经过整理的CTA进行交叉分析。分析评估了与临床病理特征(TNM分期、生存率)、基因组特征(突变频率)的相关性,以及通过在Huh7细胞中进行siRNA介导的PBK敲低进行功能验证(迁移试验)。对肿瘤免疫微环境进行单细胞RNA测序(scRNA-seq)分析。

结果

PBK过表达与晚期TNM分期(<0.05)和较差的生存率(对数秩检验=0.003)显著相关。基因组分析揭示了不同的突变谱:高PBK肿瘤显示出更高的 突变频率(39%对17%),但 突变减少(20%对31%)。同时表现出PBK过表达和高TMB的患者预后最差。功能验证证实,PBK敲低显著抑制Huh7细胞迁移能力(<0.05)。scRNA-seq分析显示,富含PBK的肿瘤中免疫抑制性SPP1(+)巨噬细胞(22.33%对6.6%,FDR校正<0.001)和CD8(+)SLC4A10(+)MAIT细胞(9.82%对4.7%,FDR校正<0.

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/ac8a9d40c5aa/JHC-12-1453-g0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/fc6745dc65b3/JHC-12-1453-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/f57667219939/JHC-12-1453-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/8ac80f9b72b4/JHC-12-1453-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/7b6758c5afb6/JHC-12-1453-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/16e26db66ca6/JHC-12-1453-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/da2f22505d3e/JHC-12-1453-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/f5b187831f5f/JHC-12-1453-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/ac8a9d40c5aa/JHC-12-1453-g0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/fc6745dc65b3/JHC-12-1453-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/f57667219939/JHC-12-1453-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/8ac80f9b72b4/JHC-12-1453-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/7b6758c5afb6/JHC-12-1453-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/16e26db66ca6/JHC-12-1453-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/da2f22505d3e/JHC-12-1453-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/f5b187831f5f/JHC-12-1453-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/793e/12279550/ac8a9d40c5aa/JHC-12-1453-g0008.jpg

相似文献

1
Integrated Multi-Omics Profiling Identifies PDZ-Binding Kinase (PBK) as a Novel Prognostic Biomarker in Hepatocellular Carcinoma.整合多组学分析确定PDZ结合激酶(PBK)为肝细胞癌的一种新型预后生物标志物。
J Hepatocell Carcinoma. 2025 Jul 17;12:1453-1469. doi: 10.2147/JHC.S493907. eCollection 2025.
2
The role of JPT1 in hepatocellular carcinoma: tumor progression, microtubule dynamics regulation, and potential mechanisms within the immune microenvironment.JPT1在肝细胞癌中的作用:肿瘤进展、微管动力学调节及免疫微环境中的潜在机制
Discov Oncol. 2025 Jul 3;16(1):1258. doi: 10.1007/s12672-025-03066-1.
3
Nuclear factor IA-mediated transcriptional regulation of crystallin αB inhibits hepatocellular carcinoma progression.核因子IA介导的晶状体蛋白αB转录调控抑制肝细胞癌进展。
Mol Clin Oncol. 2025 Jun 20;23(2):72. doi: 10.3892/mco.2025.2867. eCollection 2025 Aug.
4
SPP1+ tumor-associated macrophages define a high-risk subgroup and inform personalized therapy in hepatocellular carcinoma.SPP1+肿瘤相关巨噬细胞定义了一个高危亚组,并为肝细胞癌的个性化治疗提供依据。
Front Oncol. 2025 Jul 1;15:1606195. doi: 10.3389/fonc.2025.1606195. eCollection 2025.
5
Taurine-mediated metabolic immune crosstalk indicates and promotes immunosuppression with anti-PD-1 resistance in bladder cancer.牛磺酸介导的代谢免疫串扰表明并促进膀胱癌中抗程序性死亡蛋白1(PD-1)耐药的免疫抑制。
Front Immunol. 2025 Jun 24;16:1618439. doi: 10.3389/fimmu.2025.1618439. eCollection 2025.
6
Construction and validation of a lipid metabolism-related genes prognostic signature for skin cutaneous melanoma.皮肤黑色素瘤脂质代谢相关基因预后特征的构建与验证
Biochem Biophys Res Commun. 2025 May 29;775:152115. doi: 10.1016/j.bbrc.2025.152115.
7
Prognostic and immunological implications of cathepsin Z overexpression in prostate cancer.组织蛋白酶Z在前列腺癌中过表达的预后及免疫学意义
Front Immunol. 2025 Jun 11;16:1618487. doi: 10.3389/fimmu.2025.1618487. eCollection 2025.
8
Stratification of Hepatocellular Carcinoma Using -Methyladenosine.使用N6-甲基腺苷对肝细胞癌进行分层
Cancers (Basel). 2025 Jul 2;17(13):2220. doi: 10.3390/cancers17132220.
9
Development of a Starvation Response-Based Model and Its Application in Prognostic Assessment of Liver Hepatocellular Carcinoma.基于饥饿反应的模型的开发及其在肝细胞癌预后评估中的应用
Mediators Inflamm. 2025 Jul 7;2025:8828435. doi: 10.1155/mi/8828435. eCollection 2025.
10
An immune-related biomarker index for predicting the effectiveness of immunotherapy and prognosis in hepatocellular carcinoma.一种用于预测肝细胞癌免疫治疗疗效和预后的免疫相关生物标志物指数。
J Cancer Res Clin Oncol. 2023 Sep;149(12):10319-10333. doi: 10.1007/s00432-023-04899-5. Epub 2023 Jun 5.

本文引用的文献

1
Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.2022 年全球癌症统计数据:全球 185 个国家和地区 36 种癌症的发病率和死亡率全球估计数。
CA Cancer J Clin. 2024 May-Jun;74(3):229-263. doi: 10.3322/caac.21834. Epub 2024 Apr 4.
2
Gene-based cancer-testis antigens as prognostic indicators in hepatocellular carcinoma.基于基因的癌睾丸抗原作为肝细胞癌的预后指标
Heliyon. 2023 Mar 6;9(3):e13269. doi: 10.1016/j.heliyon.2023.e13269. eCollection 2023 Mar.
3
Multiregional single-cell dissection of tumor and immune cells reveals stable lock-and-key features in liver cancer.
多区域单细胞剖析肿瘤和免疫细胞揭示肝癌中稳定的锁钥特征。
Nat Commun. 2022 Dec 7;13(1):7533. doi: 10.1038/s41467-022-35291-5.
4
A single-cell atlas of the multicellular ecosystem of primary and metastatic hepatocellular carcinoma.原发性和转移性肝细胞癌的多细胞生态系统单细胞图谱。
Nat Commun. 2022 Aug 6;13(1):4594. doi: 10.1038/s41467-022-32283-3.
5
Potential Therapeutic Strategies to Combat HCC.治疗 HCC 的潜在治疗策略。
Curr Mol Pharmacol. 2022;15(7):929-942. doi: 10.2174/1874467215666220103111009.
6
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.clusterProfiler 4.0:用于解释组学数据的通用富集工具。
Innovation (Camb). 2021 Jul 1;2(3):100141. doi: 10.1016/j.xinn.2021.100141. eCollection 2021 Aug 28.
7
PBK/TOPK: An Effective Drug Target with Diverse Therapeutic Potential.PBK/TOPK:一种具有多种治疗潜力的有效药物靶点。
Cancers (Basel). 2021 May 6;13(9):2232. doi: 10.3390/cancers13092232.
8
Insights Gained from Single-Cell Analysis of Immune Cells in the Tumor Microenvironment.肿瘤微环境中免疫细胞的单细胞分析获得的见解。
Annu Rev Immunol. 2021 Apr 26;39:583-609. doi: 10.1146/annurev-immunol-110519-071134. Epub 2021 Feb 26.
9
Cancer-testis antigen lactate dehydrogenase C4 in hepatocellular carcinoma: a promising biomarker for early diagnosis, efficacy evaluation and prognosis prediction.癌-睾丸抗原乳酸脱氢酶C4在肝细胞癌中的作用:一种用于早期诊断、疗效评估和预后预测的有前景的生物标志物。
Aging (Albany NY). 2020 Oct 9;12(19):19455-19467. doi: 10.18632/aging.103879.
10
Fast, sensitive and accurate integration of single-cell data with Harmony.利用 Harmony 实现单细胞数据的快速、灵敏和精确整合。
Nat Methods. 2019 Dec;16(12):1289-1296. doi: 10.1038/s41592-019-0619-0. Epub 2019 Nov 18.