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由植物病原菌考氏科萨科尼亚菌引起的细菌性皮肤感染:使用基质辅助激光解吸电离生物分型仪天狼星一号进行鉴定及药敏试验

Bacterial skin infection caused by a plant pathogen Kosakonia cowanii: identification with the MALDI Biotyper sirius one and susceptibility testing.

作者信息

Merlino John, Pillay Kiora, Rizzo Sophia, Baskar Sai Rupa, Seed Daniel, Siarakas Steven, Hettiarachchi Ravin, McKew Genevieve, Gray Timothy

机构信息

Department of Microbiology and Infectious Diseases, NSW Health Pathology, Concord Hospital, Sydney, Australia.

Department of Infectious Disease and Immunology, School of Medical Sciences, Faculty of Medicine and Health, University of Sydney, Sydney, Australia.

出版信息

Access Microbiol. 2025 Jan 28;7(1). doi: 10.1099/acmi.0.000923.v3. eCollection 2025.

DOI:10.1099/acmi.0.000923.v3
PMID:40698178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12281777/
Abstract

is a Gram-negative bacillus belonging to the order Enterobacterales. is a plant pathogen; we report the isolation of this organism from a gardening puncture injury from a plant. Pus examined from the site of infection showed the infecting organism as by MALDI-TOF MS Biotyper Sirius One and 16S rRNA analysis. The organism failed to be identified biochemically by the Vitek 2 XL identification system as spp. The Gram-negative bacilli on the system were biochemically identified as spp. Difficulties in species identification biochemically suggest that might potentially represent an underestimated opportunistic human pathogen in skin infections associated with plant injuries. The MALDI-TOF MS Biotyper Sirius One software was found to be a fast and reliable identification of the organism. The isolate was found to be susceptible to first-generation cephalosporins, both cefalexin and cefazolin, by disc diffusion and Vitek 2 XL, even though antibiotic breakpoints currently do not exist using European Committee on Antimicrobial Susceptibility Testing or Clinical and Laboratory Standards Institute (CLSI) guidelines for this organism.

摘要

是一种属于肠杆菌目的革兰氏阴性杆菌。是一种植物病原体;我们报告了从一名因园艺时植物刺伤而感染的患者中分离出这种微生物。通过基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)Biotyper Sirius One和16S rRNA分析,从感染部位检查的脓液显示感染微生物为。该微生物未能通过Vitek 2 XL鉴定系统进行生化鉴定为 spp。该系统上的革兰氏阴性杆菌经生化鉴定为 spp。生化鉴定物种存在困难表明,在与植物损伤相关的皮肤感染中,可能是一种未被充分认识的潜在机会性人类病原体。发现MALDI-TOF MS Biotyper Sirius One软件能够快速可靠地鉴定该微生物。通过纸片扩散法和Vitek 2 XL检测,发现该分离株对第一代头孢菌素(头孢氨苄和头孢唑林)敏感,尽管目前按照欧洲抗菌药物敏感性测试委员会或临床和实验室标准协会(CLSI)针对该微生物的指南不存在抗生素断点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/daef/12281777/857ec89e84b9/acmi-7-00923-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/daef/12281777/857ec89e84b9/acmi-7-00923-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/daef/12281777/857ec89e84b9/acmi-7-00923-g001.jpg

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本文引用的文献

1
Novel Viruses That Lyse Plant and Human Strains of .裂解植物和人类株的新型病毒
Viruses. 2021 Jul 21;13(8):1418. doi: 10.3390/v13081418.
2
Identification of Kosakonia cowanii as a rare cause of acute cholecystitis: case report and review of the literature.鉴定考克氏球菌为急性胆囊炎的罕见病因:病例报告及文献复习。
BMC Infect Dis. 2020 May 24;20(1):366. doi: 10.1186/s12879-020-05084-6.
3
Rhabdomyolysis due to bacteremia from Enterobacter cowanii caused by a rose thorn prick.因玫瑰刺刺伤导致考氏肠杆菌菌血症引起的横纹肌溶解症。
J Dermatol. 2018 Nov;45(11):e313-e314. doi: 10.1111/1346-8138.14341. Epub 2018 Apr 25.
4
Complete genome sequence of human pathogen Kosakonia cowanii type strain 888-76.人类病原体考氏科萨科尼亚888 - 76型菌株的全基因组序列
Braz J Microbiol. 2018 Jan-Mar;49(1):16-17. doi: 10.1016/j.bjm.2017.03.010. Epub 2017 Jul 19.
5
Identification and Whole Genome Sequencing of the First Case of Causing a Human Bloodstream Infection.首例导致人类血流感染病例的鉴定及全基因组测序
Front Microbiol. 2017 Jan 24;8:62. doi: 10.3389/fmicb.2017.00062. eCollection 2017.
6
Taxonomic evaluation of the genus Enterobacter based on multilocus sequence analysis (MLSA): proposal to reclassify E. nimipressuralis and E. amnigenus into Lelliottia gen. nov. as Lelliottia nimipressuralis comb. nov. and Lelliottia amnigena comb. nov., respectively, E. gergoviae and E. pyrinus into Pluralibacter gen. nov. as Pluralibacter gergoviae comb. nov. and Pluralibacter pyrinus comb. nov., respectively, E. cowanii, E. radicincitans, E. oryzae and E. arachidis into Kosakonia gen. nov. as Kosakonia cowanii comb. nov., Kosakonia radicincitans comb. nov., Kosakonia oryzae comb. nov. and Kosakonia arachidis comb. nov., respectively, and E. turicensis, E. helveticus and E. pulveris into Cronobacter as Cronobacter zurichensis nom. nov., Cronobacter helveticus comb. nov. and Cronobacter pulveris comb. nov., respectively, and emended description of the genera Enterobacter and Cronobacter.基于多位点序列分析(MLSA)的肠杆菌属分类评估:建议将 E. nimipressuralis 和 E. amnigenus 重新分类为 Lelliottia gen. nov.,分别为 Lelliottia nimipressuralis comb. nov. 和 Lelliottia amnigena comb. nov.,将 E. gergoviae 和 E. pyrinus 重新分类为 Pluralibacter gen. nov.,分别为 Pluralibacter gergoviae comb. nov. 和 Pluralibacter pyrinus comb. nov.,将 E. cowanii、E. radicincitans、E. oryzae 和 E. arachidis 重新分类为 Kosakonia gen. nov.,分别为 Kosakonia cowanii comb. nov.、Kosakonia radicincitans comb. nov.、Kosakonia oryzae comb. nov. 和 Kosakonia arachidis comb. nov.,将 E. turicensis、E. helveticus 和 E. pulveris 重新分类为 Cronobacter 属,分别为 Cronobacter zurichensis nom. nov.、Cronobacter helveticus comb. nov. 和 Cronobacter pulveris comb. nov.,并修订了肠杆菌属和 Cronobacter 属的描述。
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Isolation of Enterobacter cowanii from Eucalyptus showing symptoms of bacterial blight and dieback in Uruguay.从乌拉圭出现细菌性叶枯病和枝枯病症状的桉树上分离出考氏肠杆菌。
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Enterobacter cowaniisp. nov., a new species of the family Enterobacteriaceae.考氏肠杆菌新种,肠杆菌科的一个新物种。
Curr Microbiol. 2000 Dec;41(6):417-20. doi: 10.1007/s002840010160.