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解脂耶氏酵母中用于琥珀酸生产的CO循环利用和甲酸代谢工程

Engineering of CO recycling and formate metabolism for succinic acid production in Yarrowia lipolytica.

作者信息

Tao Huilin, Deng Jingyu, Hao Aomei, Cui Zhiyong, Qi Qingsheng

机构信息

State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, PR China.

State Key Laboratory of Microbial Technology, Shandong University, Qingdao 266237, PR China.

出版信息

Bioresour Technol. 2025 Nov;436:133029. doi: 10.1016/j.biortech.2025.133029. Epub 2025 Jul 22.

Abstract

Succinic acid (SA), a key platform chemical in biorefineries, faces industrial production challenges stemming from inefficient CO fixation and redox imbalances in microbial cell factories. Here, we report a novel strategy to enhance SA biosynthesis in unconventional yeast Yarrowia lipolytica by cooperatively integrating carbonic anhydrase (CA)-mediated CO recycling with formate metabolism. Initially, the expression of CA improved the carboxylation efficiency of reductive TCA (rTCA) pathway, resulting in the strain Hi-SA-YlCA, which produced 89.75 g/L of SA with a yield of 1.01 g/g glucose under 5 % CO conditions-the highest yield reported for yeast to date. Subsequently, formate was utilized as an auxiliary carbon source, generating both CO and NADH via formate dehydrogenase (FDH) catalysis. Through systematic strain engineering and fed-batch optimization, the engineered strain consumed 6 g formic acid in a 5-L bioreactor, yielding an SA titer of 97.54 g/L with yield of 0.64 g/g mixed carbon source (Glucose and formic acid). This corresponds to a 10.5 % increase in titer and a 4.6 % enhancement in yield relative to the control. Notably, this study pioneers the integration of CA-enhanced carbon fixation with formate-driven NADH regeneration, simultaneously improving CO availability and alleviating redox balance limitations. Our findings provide a scalable framework for sustainable SA production and advance the application of one-carbon compounds in industrial biomanufacturing.

摘要

琥珀酸(SA)是生物精炼厂中的关键平台化学品,由于微生物细胞工厂中CO固定效率低下和氧化还原失衡,面临着工业生产挑战。在此,我们报告了一种新策略,通过将碳酸酐酶(CA)介导的CO循环与甲酸代谢协同整合,来提高非常规酵母解脂耶氏酵母中SA的生物合成。最初,CA的表达提高了还原性三羧酸(rTCA)途径的羧化效率,产生了菌株Hi-SA-YlCA,该菌株在5%CO条件下产生了89.75 g/L的SA,葡萄糖产率为1.01 g/g,这是迄今为止酵母报道的最高产率。随后,甲酸被用作辅助碳源,通过甲酸脱氢酶(FDH)催化产生CO和NADH。通过系统的菌株工程改造和补料分批优化,工程菌株在5-L生物反应器中消耗了6 g甲酸,产生了97.54 g/L的SA滴度,混合碳源(葡萄糖和甲酸)的产率为0.64 g/g。这相当于滴度提高了10.5%,产率相对于对照提高了4.6%。值得注意的是,本研究开创了CA增强的碳固定与甲酸驱动的NADH再生的整合,同时提高了CO的可用性并缓解了氧化还原平衡限制。我们的研究结果为可持续SA生产提供了一个可扩展的框架,并推动了一碳化合物在工业生物制造中的应用。

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