Li Weijia, Sun Hongying, Chen Zhiwen, Zhang Yue, Zhao Jianguo
Engineering Research Center of Coal-Based Ecological Carbon Sequestration Technology of the Ministry of Education, Shanxi Datong University, Datong 037009, China.
Department of Horticulture, Shenyang Agricultural University, Shenyang 110866, China.
Biology (Basel). 2025 Jun 26;14(7):770. doi: 10.3390/biology14070770.
The family of transcription factors plays an essential role in the regulation of plant development, the transmission of hormonal signals, and the adaptation to environmental stresses seen in numerous species. However, a comprehensive analysis of the family of (daylily) is lacking, despite its potential to help understand the stress content and developmental processes of the monospecies. This study identified genes () in , which were classified into 15 subfamilies based on chromosomal location, gene structure, conserved motifs, and expression patterns. An analysis of promoter regions indicated a significant presence of elements related to hormones and stress, showcasing these genes' role in adapting to environmental pressures. The GO and KEGG analyses indicated that genes were engaged in pathways associated with developmental processes and responses to environmental stress. Notably, was identified as a key interacting protein for SHR, SCR, and DELLA subfamily members, which suggested its central role in coordinating stress response and developmental signaling. Comparative genomic mapping with seven representative monocot and dicot species underscored evolutionary conservation and divergence in functions of the family. The expression profiling of 22 genes across different daylily tissues provided insights into their tissue-specific roles. This research may promote the further exploration of the functional characteristics of genes.
转录因子家族在植物发育调控、激素信号传递以及众多物种对环境胁迫的适应过程中发挥着至关重要的作用。然而,尽管黄花菜转录因子家族有潜力帮助理解该单种属植物的胁迫内容和发育过程,但目前仍缺乏对其全面的分析。本研究在黄花菜中鉴定出了[X]个基因([基因名称]),这些基因根据染色体位置、基因结构、保守基序和表达模式被分为15个亚家族。对启动子区域的分析表明,与激素和胁迫相关的元件大量存在,这显示了这些基因在适应环境压力方面的作用。基因本体论(GO)和京都基因与基因组百科全书(KEGG)分析表明,[X]个基因参与了与发育过程和对环境胁迫响应相关的途径。值得注意的是,[基因名称]被鉴定为SHR、SCR和DELLA亚家族成员的关键相互作用蛋白,这表明其在协调胁迫响应和发育信号传导中发挥核心作用。与七个代表性单子叶和双子叶物种的比较基因组图谱强调了黄花菜转录因子家族功能上的进化保守性和差异性。对22个[基因名称]基因在不同黄花菜组织中的表达谱分析为它们在组织特异性方面的作用提供了见解。本研究可能会促进对黄花菜转录因子基因功能特性的进一步探索。