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《COVID-19组学报告:从个体组学方法到精准医学》

COVID-19-Omics Report: From Individual Omics Approaches to Precision Medicine.

作者信息

Vlasova-St Louis Irina, Fang Daniel, Amer Yara, Mohei Hesham

机构信息

Individualized Genomics and Health Program, Johns Hopkins University, Baltimore, MD 21218, USA.

APHL-CDC Laboratory Program, Silver Spring, MD 20910, USA.

出版信息

Reports (MDPI). 2023 Sep 22;6(4):45. doi: 10.3390/reports6040045.


DOI:10.3390/reports6040045
PMID:40729168
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12225330/
Abstract

During the COVID-19 pandemic, it became apparent that precision medicine relies heavily on biological multi-omics discoveries. High throughput omics technologies, such as host genomics, transcriptomics, proteomics, epigenomics, metabolomics/lipidomics, and microbiomics, have become an integral part of precision diagnostics. The large number of data generated by omics technologies allows for the identification of vulnerable demographic populations that are susceptible to poor disease outcomes. Additionally, these data help to pinpoint the omics-based biomarkers that are currently driving advancements in precision and preventive medicine, such as early diagnosis and disease prognosis, individualized treatments, and vaccination. This report summarizes COVID-19-omic studies, highlights the results of completed and ongoing omics investigations in individuals who have experienced severe disease outcomes, and examines the impact that repurposed/novel antiviral drugs, targeted immunotherapeutics, and vaccines have had on individual and public health.

摘要

在新冠疫情期间,很明显精准医学严重依赖生物多组学发现。高通量组学技术,如宿主基因组学、转录组学、蛋白质组学、表观基因组学、代谢组学/脂质组学和微生物组学,已成为精准诊断不可或缺的一部分。组学技术产生的大量数据有助于识别易患疾病且预后较差的脆弱人群。此外,这些数据有助于确定目前推动精准医学和预防医学进步的基于组学的生物标志物,如早期诊断和疾病预后、个体化治疗以及疫苗接种。本报告总结了新冠组学研究,突出了对经历严重疾病后果的个体已完成和正在进行的组学调查结果,并探讨了重新利用的/新型抗病毒药物、靶向免疫疗法和疫苗对个人和公共健康产生的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/111f/12225330/152a14617b3b/reports-06-00045-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/111f/12225330/152a14617b3b/reports-06-00045-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/111f/12225330/152a14617b3b/reports-06-00045-g001.jpg

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本文引用的文献

[1]
Rare genetic variants involved in multisystem inflammatory syndrome in children: a multicenter Brazilian cohort study.

Front Cell Infect Microbiol. 2023

[2]
Multi-omics blood atlas reveals unique features of immune and platelet responses to SARS-CoV-2 Omicron breakthrough infection.

Immunity. 2023-6-13

[3]
Remdesivir Use in the Real-World Setting: An Overview of Available Evidence.

Viruses. 2023-5-14

[4]
COVID-19: A Possible Contribution of the MAPK Pathway.

Biomedicines. 2023-5-16

[5]
COVID-19 Booster Vaccination in Early Pregnancy and Surveillance for Spontaneous Abortion.

JAMA Netw Open. 2023-5-1

[6]
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Nat Commun. 2023-5-16

[7]
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Sci Rep. 2023-5-12

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Human immune and gut microbial parameters associated with inter-individual variations in COVID-19 mRNA vaccine-induced immunity.

Commun Biol. 2023-4-20

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Genetic polymorphisms of ACE1, ACE2, IFTM3, TMPRSS2 and TNFα genes associated with susceptibility and severity of SARS-CoV-2 infection: a systematic review and meta-analysis.

Clin Exp Med. 2023-11

[10]
Nebulised interferon-β1a (SNG001) in hospitalised COVID-19: SPRINTER phase III study.

ERJ Open Res. 2023-3-27

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