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采用高通量方法实施用于诊断的实验室自建检测方法。

Implementation of a Laboratory-Developed Test for the Diagnosis of Using a High-Throughput Approach.

作者信息

Conciatori Valeria, Di Sopra Sarah, Franchin Elisa, Bekas Ioannis, Di Pietra Giuseppe, Castagliuolo Ignazio, Salata Cristiano, Del Vecchio Claudia

机构信息

Department of Molecular Medicine, University of Padua, 35121 Padua, Italy.

Microbiology and Virology Diagnostic Unit, Padua University Hospital, 35121 Padua, Italy.

出版信息

Pathogens. 2025 Jul 14;14(7):692. doi: 10.3390/pathogens14070692.

DOI:10.3390/pathogens14070692
PMID:40732737
Abstract

is a significant causative agent of atypical pneumonia in both children and adults. Timely and accurate diagnosis is crucial for appropriate patient management. Conventional methods for detecting , such as culture and serology, exhibit several limitations regarding sensitivity, specificity, and turnaround time. In contrast, real-time PCR is considered the most reliable, rapid, and sensitive technique for the diagnosis of infection. In this study, we adapted and validated an in-house real-time PCR assay for use on the fully automated Panther Fusion System. The validation process included two artificial samples, five external quality controls, and sixty-two patient samples. We evaluated the performance in terms of precision, sensitivity, linearity, and analytical sensitivity, comparing it to the original in-house assay. The Panther Fusion System demonstrated a broad dynamic range (16-1.6 × 10 copies/reaction), a robust correlation (94%) with the in-house assay, and comparable sensitivity (46 copies/mL vs. 25 copies/mL). The concordance between the in-house real-time PCR and the Panther Fusion System was 100% for both clinical samples and external quality controls. The adaptation of the test to the Panther Fusion System enabled the inclusion of among the pathogens monitored for respiratory infection surveillance. Throughout 2024, we analyzed 2567 samples, with a peak positivity rate of 38% observed in August. These findings underscore the significance of employing the diagnostic assay on the Panther Fusion System which proves valuable for the detection of infections. This platform offers the advantages of increased automation and greater throughput potential compared to other platforms, enhancing the efficiency of respiratory pathogen detection in clinical settings.

摘要

是儿童和成人非典型肺炎的重要病原体。及时准确的诊断对于恰当的患者管理至关重要。检测的传统方法,如培养和血清学,在敏感性、特异性和周转时间方面存在若干局限性。相比之下,实时聚合酶链反应(PCR)被认为是诊断感染最可靠、快速且敏感的技术。在本研究中,我们对一种内部实时PCR检测方法进行了调整并在全自动的Panther Fusion系统上进行了验证。验证过程包括两个人工样本、五个外部质量控制样本和62个患者样本。我们从精密度、灵敏度、线性和分析灵敏度方面评估了其性能,并与原始的内部检测方法进行了比较。Panther Fusion系统显示出较宽的动态范围(16 - 1.6×10拷贝/反应),与内部检测方法有很强的相关性(94%),且灵敏度相当(46拷贝/毫升对25拷贝/毫升)。内部实时PCR与Panther Fusion系统在临床样本和外部质量控制样本方面的一致性均为100%。将该检测方法适配到Panther Fusion系统使得能够将纳入呼吸道感染监测所监测的病原体之中。在2024年全年,我们分析了2567个样本,8月份观察到的阳性率峰值为38%。这些发现强调了在Panther Fusion系统上采用诊断检测方法的重要性,该方法被证明对检测感染很有价值。与其他平台相比,这个平台具有更高的自动化程度和更大的通量潜力,提高了临床环境中呼吸道病原体检测的效率。

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本文引用的文献

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Surveillance of influenza viruses circulating from 2017/2018 to 2023/2024 seasons in Veneto Region, North-East Italy.对意大利东北部威尼托大区2017/2018至2023/2024季节流行的流感病毒进行监测。
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Detection of Mycoplasma pneumoniae and Chlamydia pneumoniae using a laboratory-developed high-throughput test for the Panther Fusion system.
使用实验室研发的针对Panther Fusion系统的高通量检测方法检测肺炎支原体和肺炎衣原体。
Diagn Microbiol Infect Dis. 2025 Jun;112(2):116786. doi: 10.1016/j.diagmicrobio.2025.116786. Epub 2025 Mar 4.
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Evaluation of three rapid assays for detecting Mycoplasma pneumoniae in nasopharyngeal specimens.用于检测鼻咽标本中肺炎支原体的三种快速检测方法的评估
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Laboratory diagnosis and treatment of infection in children: a review.儿童感染的实验室诊断与治疗:综述
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The Art and Science of Diagnosing Mycoplasma pneumoniae Infection.诊断肺炎支原体感染的艺术与科学
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: A significant but underrated pathogen in paediatric community-acquired lower respiratory tract infections.: 在小儿社区获得性下呼吸道感染中,一种重要但被低估的病原体。
Indian J Med Res. 2018 Jan;147(1):23-31. doi: 10.4103/ijmr.IJMR_1582_16.