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Specific Nested PCR for the Detection of 16SrI and 16SrII Group Phytoplasmas Associated with Yellow Leaf Disease of Areca Palm in Hainan, China.

作者信息

Ge Huiyuan, Meng Xiuli, Lin Zhaowei, Jan Saad, Song Weiwei, Qin Weiquan, Tang Qinghua, Zhu Xiaoqiong

机构信息

Department of Plant Pathology and MARA Key Laboratory of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing 100193, China.

Coconut Research Institute/HPDST Hainan Innovation Center of Academician Team, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China.

出版信息

Plants (Basel). 2025 Jul 11;14(14):2144. doi: 10.3390/plants14142144.

DOI:10.3390/plants14142144
PMID:40733381
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12299459/
Abstract

Yellow leaf disease (YLD), caused by the areca palm yellow leaf phytoplasma (APYL), poses a significant threat to the sustainability of the areca palm industry. Timely and accurate detection is essential for effectively diagnosing and managing this disease. This study developed a novel nested PCR system using primers specifically designed from conserved regions of the phytoplasma 16S rDNA sequence to overcome limitations such as false positives often associated with universal nested PCR primers. The resulting primer pairs HNP-1F/HNP-1R (outer) and HNP-2F/HNP-2R (inner) consistently amplified a distinct 429 bp fragment from APYL strains belonging to the 16SrI and 16SrII groups. The detection sensitivity reached 7.5 × 10 ng/μL for 16SrI and 4 × 10 ng/μL for 16SrII. Field validation using leaf samples from symptomatic areca palms confirmed the high specificity and reliability of the new primers in detecting APYL. Compared to conventional universal primers (P1/P7 and R16mF2/R16mR1), this newly developed nested PCR system demonstrated higher specificity, sensitivity, and speed, making it a valuable tool for the early diagnosis and management of YLD in areca palms.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/6626d3f23b86/plants-14-02144-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/1948907d7742/plants-14-02144-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/93882d084793/plants-14-02144-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/7faf1d917093/plants-14-02144-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/abcb86ca83c2/plants-14-02144-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/bb6d3a1ca088/plants-14-02144-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/ba0260e193e0/plants-14-02144-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/b85a81feafa4/plants-14-02144-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/6626d3f23b86/plants-14-02144-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/1948907d7742/plants-14-02144-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/93882d084793/plants-14-02144-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/7faf1d917093/plants-14-02144-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/abcb86ca83c2/plants-14-02144-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/bb6d3a1ca088/plants-14-02144-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/ba0260e193e0/plants-14-02144-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/b85a81feafa4/plants-14-02144-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44f7/12299459/6626d3f23b86/plants-14-02144-g008.jpg

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本文引用的文献

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Molecular Identification of ' Phytoplasma malaysianum'-Related Strains Associated with Palm Yellow Leaf Disease and Phylogenetic Diversity of the Phytoplasmas Within the 16SrXXXII Group.分子鉴定与棕榈黄叶病相关的‘马来西亚植原体’相关菌株及 16SrXXXII 组植原体的系统发育多样性。
Plant Dis. 2024 May;108(5):1331-1343. doi: 10.1094/PDIS-11-23-2275-RE. Epub 2024 May 8.
2
Development of a Specific Nested PCR Assay for the Detection of 16SrI Group Phytoplasmas Associated with Sisal Purple Leafroll Disease in Sisal Plants and Mealybugs.用于检测与剑麻紫叶卷曲病相关的剑麻植株和粉蚧中16SrI组植原体的特异性巢式PCR检测方法的开发
Plants (Basel). 2022 Oct 23;11(21):2817. doi: 10.3390/plants11212817.
3
Phytoplasma Taxonomy: Nomenclature, Classification, and Identification.
植原体分类学:命名、分类与鉴定
Biology (Basel). 2022 Jul 26;11(8):1119. doi: 10.3390/biology11081119.
4
Plants and Phytoplasmas: When Bacteria Modify Plants.植物与植原体:当细菌改变植物时
Plants (Basel). 2022 May 27;11(11):1425. doi: 10.3390/plants11111425.
5
Rapid and Efficient Detection of 16SrI Group Areca Palm Yellow Leaf Phytoplasma in China by Loop-Mediated Isothermal Amplification.环介导等温扩增技术在中国快速高效检测16SrI组槟榔黄叶植原体
Plant Pathol J. 2020 Oct 1;36(5):459-467. doi: 10.5423/PPJ.OA.06.2020.0094.
6
Refinement of the Taxonomic Structure of 16SrXI and 16SrXIV Phytoplasmas of Gramineous Plants using Multilocus Sequence Typing.利用多位点序列分型细化禾本科植物16SrXI和16SrXIV植原体的分类结构
Plant Dis. 2016 Oct;100(10):2001-2010. doi: 10.1094/PDIS-02-16-0244-RE. Epub 2016 Aug 2.
7
Simulating coconut growth, development and yield with the InfoCrop-coconut model.使用InfoCrop-椰子模型模拟椰子的生长、发育和产量。
Tree Physiol. 2008 Jul;28(7):1049-58. doi: 10.1093/treephys/28.7.1049.