Cai Xia, Shan Hui, Wang Jiaojiao, Qin Jiaxin, Gong Huiling, Cai Jun, He Jin
School of Life Science and Engineering, Lanzhou University of Technology, Lanzhou, Gansu, China.
Department of Microbiology, College of Life Sciences, Nankai University, Tianjin, China.
Noncoding RNA Res. 2025 Jul 6;15:44-50. doi: 10.1016/j.ncrna.2025.07.002. eCollection 2025 Dec.
Small RNAs (sRNAs) are widely used by bacteria to regulate diverse biological processes. Although they are generally considered "non-coding", some sRNAs (called dual-function sRNAs) have been found to encode small proteins, which are usually less than 50 amino acids in length and have long been overlooked due to significant challenges in their annotation and biochemical detection. However, in the past few decades, an increasing number of small proteins encoded by dual-function sRNAs have been reported. Previous reviews of dual-function sRNAs have mainly focused on their base-pairing nucleic acid functions, with less emphasis on the nature of their translated peptides, resulting in limited understanding of their full functional scope. This article reviews ten small proteins encoded by dual-function sRNAs and introduces their physiological functions, interacting protein partners, and the research methods used, aiming to provide new perspectives and directions for the study of small proteins and enhance understanding of bacterial regulatory mechanisms mediated by dual-function sRNAs.
小RNA(sRNA)被细菌广泛用于调节多种生物学过程。尽管它们通常被认为是“非编码的”,但一些sRNA(称为双功能sRNA)已被发现可编码小蛋白,这些小蛋白通常长度小于50个氨基酸,并且由于其注释和生化检测面临重大挑战,长期以来一直被忽视。然而,在过去几十年中,越来越多由双功能sRNA编码的小蛋白被报道。以前对双功能sRNA的综述主要集中在它们的碱基配对核酸功能上,而较少关注其翻译肽段的性质,导致对其完整功能范围的理解有限。本文综述了由双功能sRNA编码的十种小蛋白,并介绍了它们的生理功能、相互作用的蛋白质伙伴以及所使用的研究方法,旨在为小蛋白的研究提供新的视角和方向,并增进对双功能sRNA介导的细菌调控机制的理解。