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用于改进基于表面等离子体共振的HIV DNA检测的WS/SiN数值分析

Numerical analysis of WS/SiN for improved SPR-based HIV DNA detection.

作者信息

Tene Talia, Cevallos Yesenia, Marcatoma Tixi Jessica Alexandra, Pérez Londo Natalia Alexandra, Gahramanli Lala, Vacacela Gomez Cristian

机构信息

Department of Chemistry, Universidad Técnica Particular de Loja, Loja, Ecuador.

Universidad San Francisco de Quito IMNE, Quito, Ecuador.

出版信息

Front Bioeng Biotechnol. 2025 Jul 17;13:1577925. doi: 10.3389/fbioe.2025.1577925. eCollection 2025.

DOI:10.3389/fbioe.2025.1577925
PMID:40746590
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12310735/
Abstract

Surface-plasmon-resonance (SPR) sensors provide label-free nucleic-acid diagnostics, yet they must detect the sub-nanometre refractive-index changes generated by short HIV-DNA hybridisation. Using a transfer-matrix framework, we design a multilayer architecture that couples a 50 nm silver mirror to the analyte through a 7 nm (10 nm) silicon-nitride spacer capped with a monolayer of WS. This impedance-matched stack (Sys) concentrates the evanescent field at the recognition surface while chemically passivating the metal. Numerical screening calibrated with published optical constants predicts an angular sensitivity of 167° RIU, a limit of detection of 2.99 × 10 RIU and a quality factor of 56.9 RIU, outperforming gold-based benchmarks and approaching values reported for more reactive ZnSe buffers. Reversing the dielectric sequence (Sys) increases sensitivity to 201° RIU but lowers fabrication yield and storage stability, establishing Sys as the most scalable option. Proof-of-concept measurements demonstrate sub-picomolar quantification of HIV DNA in phosphate-buffered saline without enzymatic amplification. The materials palette is compatible with complementary-metal-oxide-semiconductor processes, enabling streamlined integration of high-resolution SPR sensing into point-of-care viral-load platforms for resource-limited settings.

摘要

表面等离子体共振(SPR)传感器可实现无标记核酸诊断,但必须检测由短链HIV-DNA杂交产生的亚纳米级折射率变化。我们使用转移矩阵框架设计了一种多层结构,该结构通过覆盖有单层WS的7纳米(10纳米)氮化硅间隔层将50纳米银镜与分析物耦合。这种阻抗匹配堆栈(Sys)在识别表面集中倏逝场,同时对金属进行化学钝化。用已发表的光学常数校准的数值筛选预测,其角度灵敏度为167°/RIU,检测限为2.99×10⁻⁶ RIU,品质因数为56.9 RIU,优于基于金的基准,并接近报道的更具反应性的ZnSe缓冲液的值。反转介电序列(Sys)可将灵敏度提高到201°/RIU,但会降低制造良率和存储稳定性,从而确定Sys是最具可扩展性的选择。概念验证测量表明,在无酶扩增的磷酸盐缓冲盐水中可对HIV DNA进行亚皮摩尔级定量。该材料组合与互补金属氧化物半导体工艺兼容,能够将高分辨率SPR传感简化集成到资源有限环境下的即时护理病毒载量平台中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/a7c81ca1a00f/fbioe-13-1577925-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/33592cc53989/fbioe-13-1577925-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/38f86cb57d7d/fbioe-13-1577925-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/32840340d350/fbioe-13-1577925-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/8478378efe23/fbioe-13-1577925-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/64d5c72a84b2/fbioe-13-1577925-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/915bd8ac2a48/fbioe-13-1577925-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/14b1abe70b94/fbioe-13-1577925-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/c4bab53ad772/fbioe-13-1577925-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/a7c81ca1a00f/fbioe-13-1577925-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/33592cc53989/fbioe-13-1577925-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/38f86cb57d7d/fbioe-13-1577925-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/32840340d350/fbioe-13-1577925-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/8478378efe23/fbioe-13-1577925-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/64d5c72a84b2/fbioe-13-1577925-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/915bd8ac2a48/fbioe-13-1577925-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/14b1abe70b94/fbioe-13-1577925-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/c4bab53ad772/fbioe-13-1577925-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/68b0/12310735/a7c81ca1a00f/fbioe-13-1577925-g009.jpg

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