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由于纯合无义变异导致的甘氨酸 - 酰基转移酶缺乏症:一种新型的先天性代谢缺陷。

Glycine -Acyltransferase Deficiency due to a Homozygous Nonsense Variant in the : A Novel Inborn Error of Metabolism.

作者信息

Nourbakhsh Mona, Miryounesi Mohammad, Tale Ali, Karimzadeh Parvaneh, Sadeghi Hossein, Ghasemi Mohammad-Reza, Alipour Nasrin, Pourbakhtyaran Elham, Hooman Nakisa, Razzaghy-Azar Maryam, Nourbakhsh Mitra, Klaas Lil, Schulke Daniel, Sass Jörn Oliver

机构信息

Aliasghar Clinical Research Development Center, Department of Pediatrics, School of Medicine Iran University of Medical Sciences Tehran Iran.

Department of Medical Genetics, School of Medicine Shahid Beheshti University of Medical Sciences Tehran Iran.

出版信息

JIMD Rep. 2025 Jul 29;66(5):e70032. doi: 10.1002/jmd2.70032. eCollection 2025 Sep.

DOI:10.1002/jmd2.70032
PMID:40747359
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12307128/
Abstract

The enzyme glycine -acyltransferase (GLYAT) plays a crucial role in detoxifying both xenobiotic and endogenous compounds that contain a carboxylic acid group, such as benzoic acid. Data on the impact of human GLYAT on the glycine conjugation pathway is limited and difficult to determine. In this study, we present a 5.7-year-old girl with gross motor delay first noticed at age 5 months and speech delay evident at the time of diagnosis. To the best of our knowledge, no case of GLYAT enzyme deficiency has been reported to date. Whole exome sequencing (WES) identified a homozygous nonsense variant (NM_201648.3: c.322C>T: p.(Q108Ter)) in the that abolished GLYAT activity in vitro. The detected variant was confirmed by Sanger sequencing. The patient was treated with pantothenic acid and a mitochondrial cocktail consisting of coenzyme Q10, vitamins B1, B2, B6, B12, C, folate, and carnitine, together with a low-protein diet, which led to the alleviation of edema and hypotonia and an improvement in her motor function and social interactions. Her serum glycine level was also normalized. This case identifies a novel homozygous nonsense variant in the , leading to glycine -acyltransferase enzyme deficiency and associated developmental delays.

摘要

甘氨酸 - 酰基转移酶(GLYAT)在对含有羧酸基团的外源性和内源性化合物(如苯甲酸)进行解毒过程中起着关键作用。关于人类GLYAT对甘氨酸结合途径影响的数据有限且难以确定。在本研究中,我们报告了一名5.7岁女童,其大运动发育迟缓于5个月大时首次被发现,言语发育迟缓在诊断时明显。据我们所知,迄今为止尚未报道过GLYAT酶缺乏的病例。全外显子组测序(WES)在[具体基因名称未给出]中鉴定出一个纯合无义变异(NM_201648.3: c.322C>T: p.(Q108Ter)),该变异在体外消除了GLYAT活性。通过桑格测序确认了检测到的变异。该患者接受了泛酸以及由辅酶Q10、维生素B1、B2、B6、B12、C、叶酸和肉碱组成的线粒体复合制剂治疗,同时采用低蛋白饮食,这导致水肿和肌张力减退得到缓解,运动功能和社交互动有所改善。她的血清甘氨酸水平也恢复正常。该病例在[具体基因名称未给出]中鉴定出一种新的纯合无义变异,导致甘氨酸 - 酰基转移酶缺乏及相关发育迟缓。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/242ae278ec8e/JMD2-66-e70032-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/67b7dcd87853/JMD2-66-e70032-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/55b64da1e4c9/JMD2-66-e70032-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/242ae278ec8e/JMD2-66-e70032-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/67b7dcd87853/JMD2-66-e70032-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/55b64da1e4c9/JMD2-66-e70032-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7160/12307128/242ae278ec8e/JMD2-66-e70032-g002.jpg

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本文引用的文献

1
The glycine -acyltransferases, GLYAT and GLYATL1, contribute to the detoxification of isovaleryl-CoA - an and validation.甘氨酸酰基转移酶GLYAT和GLYATL1有助于异戊酰辅酶A的解毒作用—— 和验证。 (注:原文“an and validation”表述似乎不完整或有误,翻译可能存在一定局限性)
Comput Struct Biotechnol J. 2023 Jan 31;21:1236-1248. doi: 10.1016/j.csbj.2023.01.041. eCollection 2023.
2
Functional Characterisation of Three Glycine -Acyltransferase Variants and the Effect on Glycine Conjugation to Benzoyl-CoA.三种甘氨酸酰基转移酶变体的功能特征及其对苯甲酰辅酶 A 与甘氨酸结合的影响。
Int J Mol Sci. 2021 Mar 18;22(6):3129. doi: 10.3390/ijms22063129.
3
Frequent sequence variants of human glycine N-acyltransferase (GLYAT) and inborn errors of metabolism.
人类甘氨酸 N-酰基转移酶 (GLYAT) 的常见序列变异和先天性代谢缺陷。
Biochimie. 2021 Apr;183:30-34. doi: 10.1016/j.biochi.2021.02.002. Epub 2021 Feb 7.
4
Glycine Signaling in the Framework of Dopamine-Glutamate Interaction and Postsynaptic Density. Implications for Treatment-Resistant Schizophrenia.多巴胺-谷氨酸相互作用及突触后致密物框架下的甘氨酸信号传导。对难治性精神分裂症的意义。
Front Psychiatry. 2020 May 14;11:369. doi: 10.3389/fpsyt.2020.00369. eCollection 2020.
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The hallmarks of mitochondrial dysfunction in chronic kidney disease.慢性肾脏病中线粒体功能障碍的特征。
Kidney Int. 2017 Nov;92(5):1051-1057. doi: 10.1016/j.kint.2017.05.034.
6
Benzoic acid and its derivatives as naturally occurring compounds in foods and as additives: Uses, exposure, and controversy.苯甲酸及其衍生物作为食品中的天然化合物和添加剂:用途、暴露和争议。
Crit Rev Food Sci Nutr. 2017 Sep 22;57(14):3084-3103. doi: 10.1080/10408398.2015.1087964.
7
Conservation of the coding regions of the glycine N-acyltransferase gene further suggests that glycine conjugation is an essential detoxification pathway.甘氨酸N-酰基转移酶基因编码区的保守性进一步表明,甘氨酸结合是一条必不可少的解毒途径。
Gene. 2015 Oct 15;571(1):126-34. doi: 10.1016/j.gene.2015.06.081. Epub 2015 Jul 3.
8
A new perspective on the importance of glycine conjugation in the metabolism of aromatic acids.甘氨酸共轭在芳香酸代谢中重要性的新视角。
Drug Metab Rev. 2014 Aug;46(3):343-61. doi: 10.3109/03602532.2014.908903. Epub 2014 Apr 22.
9
Attention deficit hyperactivity disorder and N-methyl-D-aspartate (NMDA) dysregulation.注意力缺陷多动障碍与N-甲基-D-天冬氨酸(NMDA)调节异常
Curr Pharm Des. 2014;20(32):5180-5. doi: 10.2174/1381612819666140110115227.
10
Musculoskeletal manifestations of neonatal nonketotic hyperglycinemia.新生儿非酮症高甘氨酸血症的肌肉骨骼表现
J Child Orthop. 2012 Jul;6(3):199-203. doi: 10.1007/s11832-012-0407-1. Epub 2012 May 25.