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十字路口的自然历史收藏:不断变化的优先事项与数据驱动的机遇

Natural History Collections at the Crossroads: Shifting Priorities and Data-Driven Opportunities.

作者信息

Forbes Owen, Thrall Peter H, Young Andrew G, Ong Cheng Soon

机构信息

CSIRO National Research Collections Australia, Canberra, Australia.

CSIRO Data61, Canberra, Australia.

出版信息

Ecol Lett. 2025 Aug;28(8):e70188. doi: 10.1111/ele.70188.

DOI:10.1111/ele.70188
PMID:40747995
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12315612/
Abstract

Natural history collections face a critical juncture as environmental change and biodiversity crises accelerate. While collections data are key components of eco-evolutionary and environmental research in both fundamental and applied contexts, collecting strategies remain primarily taxonomically motivated. We argue that sampling strategies must evolve to better address broader ecological challenges, through emerging applications enabled by advances in data science and digital technology. Here, we propose a flexible framework using modern statistical approaches to optimise sampling design and research prioritisation. By considering biodiversity, environmental, spatial and temporal dimensions, we demonstrate how information theory and decision science tools can support strategic collecting, databasing and digitisation efforts. Our framework provides an evidence-based pathway for collections to enhance their role as critical research infrastructure for addressing 21st century environmental challenges. To illustrate this data-driven approach to research prioritisation, we present an example based on sampling design for wombats (Vombatus ursinus) in Australia.

摘要

随着环境变化和生物多样性危机加速,自然历史藏品面临着一个关键节点。虽然藏品数据在基础和应用背景下都是生态进化和环境研究的关键组成部分,但收集策略仍主要受分类学驱动。我们认为,通过数据科学和数字技术进步带来的新兴应用,采样策略必须不断发展,以更好地应对更广泛的生态挑战。在此,我们提出一个灵活的框架,使用现代统计方法来优化采样设计和研究优先级。通过考虑生物多样性、环境、空间和时间维度,我们展示了信息论和决策科学工具如何支持战略性收集、数据库建设和数字化工作。我们的框架为藏品提供了一条基于证据的途径,以增强其作为应对21世纪环境挑战的关键研究基础设施的作用。为了说明这种数据驱动的研究优先级确定方法,我们给出一个基于澳大利亚袋熊(Vombatus ursinus)采样设计的例子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcfe/12315612/1045767671ea/ELE-28-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcfe/12315612/1824d5ee353d/ELE-28-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcfe/12315612/1045767671ea/ELE-28-0-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcfe/12315612/1824d5ee353d/ELE-28-0-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dcfe/12315612/1045767671ea/ELE-28-0-g002.jpg

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本文引用的文献

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What 'unexplored' means: mapping regions with digitized natural history records to look for 'biodiversity blindspots'.“未被探索”的含义:利用数字化自然历史记录绘制区域,以寻找“生物多样性盲点”。
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Machine Learning for Biological Design.机器学习在生物设计中的应用。
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Specimen collection is essential for modern science.标本采集对于现代科学至关重要。
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Temporal collections to study invasion biology.用于研究入侵生物学的时间序列数据集。
Mol Ecol. 2023 Dec;32(24):6729-6742. doi: 10.1111/mec.17176. Epub 2023 Oct 24.
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Challenges and directions in analytical paleobiology.分析古生物学的挑战与方向
Paleobiology. 2023 Aug;49(3):377-393. doi: 10.1017/pab.2023.3. Epub 2023 Feb 27.
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Mass production of unvouchered records fails to represent global biodiversity patterns.大量未经凭证记录的物种无法代表全球生物多样性模式。
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A global approach for natural history museum collections.全球自然历史博物馆藏品策略。
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Bioscience. 2022 Aug 3;72(10):978-987. doi: 10.1093/biosci/biac060. eCollection 2022 Oct.
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Climate change increases cross-species viral transmission risk.气候变化增加了跨物种病毒传播的风险。
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