Asghar Muhammad Umer, Zaidi Arsalan Haseeb, Tariq Muhammad, Ain Noor Ul
National Probiotic Lab, National Institute for Biotechnology and Genetic Engineering-College (NIBGE-C), Faisalabad, 38000, Pakistan.
Pakistan Institute of Engineering & Applied Sciences (PIEAS), Nilore Islamabad (ICT), Islamabad, 45650, Pakistan.
Sci Rep. 2025 Aug 1;15(1):28108. doi: 10.1038/s41598-025-12736-7.
The rise of biocide- and antibiotic-resistant microbes in hospital settings demands urgent and innovative strategies to curb the spread of antimicrobial resistance (AMR). This study presents an innovative disinfectant strategy that leverages antimicrobial peptides (APep) extracted from antimicrobial-producing (AMP) strains isolated from hospital environments under intense antibiotic pressure. Unlike traditional probiotic disinfectants that rely on live bacterial strains prone to AMR, this approach directly utilizes APep from non-resistant strains with a high antioxidant potential to combat AMR and oxidative stress. Candidate strains were selected based on antimicrobial susceptibility profiling, oxidative stress assays, and screening for antimicrobial activity against hospital-acquired pathogens. The active compounds were characterized using fourier-transform infrared (FTIR) spectroscopy, high-performance liquid chromatography (HPLC), liquid chromatography-tandem mass spectrometry (LC-MS/MS), and whole-genome sequencing. Biosynthetic pathways were explored using in silico analyses, including biosynthetic gene clusters (BGCs) mapping, APep prediction, and gene interaction network analyses. Bacillus paralicheniformis UAB33 was identified as a potent producer of bacitracin B1 (UB1), exhibiting strong activity against biocides and vancomycin-resistant Staphylococcus aureus (VRSA). Genomic analysis revealed 14 BGCs, including key non-ribosomal peptides (NRPs) such as bacitracin, lichenysin, and bacillibactin. A unique pathway involving bacA, bacB, and bacC genes, along with adjacent post-translationally modified peptides (RiPP) clusters, was elucidated to enhance bacitracin synthesis. UB1-infused disinfectant wipes significantly reduce microbial loads on hospital surfaces in vitro, demonstrating a promising strategy for mitigating resistant pathogens. This strategy presents a promising approach for curbing the spread of antibiotic resistance in healthcare settings and offers a scalable and innovative solution for infection control.
医院环境中对杀菌剂和抗生素具有抗性的微生物不断增加,这就需要采取紧急且创新的策略来遏制抗菌药物耐药性(AMR)的传播。本研究提出了一种创新的消毒策略,该策略利用从在高强度抗生素压力下从医院环境中分离出的抗菌产生菌(AMP)菌株中提取的抗菌肽(APep)。与依赖易产生AMR的活细菌菌株的传统益生菌消毒剂不同,这种方法直接利用来自具有高抗氧化潜力的非耐药菌株的APep来对抗AMR和氧化应激。根据抗菌药敏分析、氧化应激试验以及对医院获得性病原体的抗菌活性筛选来选择候选菌株。使用傅里叶变换红外(FTIR)光谱、高效液相色谱(HPLC)、液相色谱 - 串联质谱(LC - MS/MS)和全基因组测序对活性化合物进行表征。利用计算机分析探索生物合成途径,包括生物合成基因簇(BGC)映射、APep预测和基因相互作用网络分析。解淀粉芽孢杆菌UAB33被鉴定为杆菌肽B1(UB1)的有效生产者,对杀菌剂和耐万古霉素金黄色葡萄球菌(VRSA)表现出强大活性。基因组分析揭示了14个BGC,包括杆菌肽、地衣芽孢菌素和杆菌铁载体等关键非核糖体肽(NRP)。阐明了一条涉及bacA、bacB和bacC基因以及相邻的翻译后修饰肽(RiPP)簇的独特途径,以增强杆菌肽的合成。注入UB1的消毒湿巾在体外显著降低了医院表面的微生物负荷,证明了一种减轻耐药病原体的有前景的策略。该策略为遏制医疗保健环境中抗生素耐药性的传播提供了一种有前景的方法,并为感染控制提供了一种可扩展的创新解决方案。