Tan Xingyan, Zhang Xiaorui, He Zhiqun, Luo Zhiping, An Ni, Ye Kerui, Ke Donghui, Li Yuqing, Zeng Jumei
West China School of Public Health and West China Fourth Hospital, West China-PUMC C.C. Chen Institute of Health, Sichuan University, Chengdu, 610041, China.
Chengdu Center for Disease Control and Prevention, Chengdu, Sichuan, China.
BMC Microbiol. 2025 Aug 11;25(1):492. doi: 10.1186/s12866-025-04254-3.
The rising prevalence of multidrug-resistant mycobacteria necessitates novel therapeutic strategies. Phages targeting clinically relevant mycobacteria remain scarce, lytic phages represent promising alternatives. In this study, we isolated mycobacterium phage WST1 from wastewater, exhibiting strict lytic specificity for Mycobacterium smegmatis. Genomic analysis revealed a 38,120 bp dsDNA genome (64.60% GC) with 59 ORFs, including tyrosine integrase, hicA/B toxin-antitoxin, but no virulence or resistance genes. WST1 demonstrated broad thermal stability (4-60℃) and pH (4-9) stability, but is UV-sensitive. Phylogenetically, WST1 formed a distinct clade with mycobacterium phage IdentityCrisis, the average nucleotide identity is 83.9%, WST1 possesses a terminase which shows 100% amino acid identity to IdentityCrisis, while its endolysin shows over 90% identity to other distant phages, showcasing the modular evolution of WST1.We discovered a new, safe phage candidate useful for both phage diversity studying and genetic engineering, thereby expanding the resources for mycobacteriophage therapeutic development.
多重耐药分枝杆菌的患病率不断上升,因此需要新的治疗策略。针对临床相关分枝杆菌的噬菌体仍然稀缺,裂解性噬菌体是有前景的替代方案。在本研究中,我们从废水中分离出分枝杆菌噬菌体WST1,它对耻垢分枝杆菌表现出严格的裂解特异性。基因组分析显示其基因组为38,120 bp的双链DNA(GC含量64.60%),有59个开放阅读框,包括酪氨酸整合酶、hicA/B毒素-抗毒素,但没有毒力或抗性基因。WST1表现出广泛的热稳定性(4-60℃)和pH稳定性(4-9),但对紫外线敏感。在系统发育上,WST1与分枝杆菌噬菌体IdentityCrisis形成一个独特的进化枝,平均核苷酸同一性为83.9%,WST1拥有一种末端酶,与IdentityCrisis的氨基酸同一性为100%,而其溶菌酶与其他远缘噬菌体的同一性超过90%,展示了WST1的模块化进化。我们发现了一种新的、安全的噬菌体候选物,可用于噬菌体多样性研究和基因工程,从而扩大了分枝杆菌噬菌体治疗开发的资源。