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胡蜂(膜翅目:胡蜂科)马蜂的染色体水平基因组组装

Chromosome-level genome assembly of the wasp Vespa mandarinia (Hymenoptera: Vespidae).

作者信息

Niu Xiao-Yun, Shi Yuan-Chong, Mo Hai-Feng, Yang Pu

机构信息

Institute of Highland Forest Science, Chinese Academy of Forestry, Kunming, 650224, China.

Key Laboratory of Breeding and Utilization of Resource Insects of National Forestry and Grassland Administration, Kunming, 650224, China.

出版信息

Sci Data. 2025 Aug 11;12(1):1404. doi: 10.1038/s41597-025-05749-4.

Abstract

The wasp Vespa mandarinia raised in Yunnan Province of China exhibits a relatively large body size, potent toxicity, invasive potential, and ecological impacts. These characteristics are closely linked to its acute olfactory sensitivity, venom-aided predation, and flight capacity. However, the lack of high-quality genomic resources limits understanding of its adaptive evolution and invasive potential. In this study, DNBSEQ, Oxford Nanopore sequencing, and Hi-C sequencing were employed to sequence and assemble the genome of V. mandarinia. The assembled genome consisted of 25 chromosomes. The genome size was 191.80 Mb. The scaffold N50 was 9.20 Mb. The complete BUSCOs of genome was 99.5%. A total of 12,023 genes in the V. mandarinia genome were predicted and 11,541 genes (99.84%) were functionally annotated. V. mandarinia wasps showed high level of collinearity with V. velutina. The genome will provide valuable resources for understanding the evolution of wasp, also provide information for venom research on V. mandarinia.

摘要

在中国云南省饲养的金环胡蜂体型相对较大,毒性强,具有入侵性且对生态有影响。这些特征与其敏锐的嗅觉、毒液辅助捕食及飞行能力密切相关。然而,缺乏高质量的基因组资源限制了对其适应性进化和入侵潜力的了解。在本研究中,采用DNBSEQ、牛津纳米孔测序和Hi-C测序对金环胡蜂的基因组进行测序和组装。组装后的基因组由25条染色体组成。基因组大小为191.80 Mb。支架N50为9.20 Mb。基因组的完整BUSCOs为99.5%。金环胡蜂基因组中共预测出12,023个基因,其中11,541个基因(99.84%)得到了功能注释。金环胡蜂与黄脚胡蜂表现出高度的共线性。该基因组将为理解胡蜂的进化提供有价值的资源,也为金环胡蜂的毒液研究提供信息。

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